ENSCSAG00000008562 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000008562 T090433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.827 0.996
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.827 0.996
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.827 0.996
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.827 0.996
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.827 0.996
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.827 0.996
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.827 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000004821 C2H2 ZF 122 144
ENSCSAP00000004821 C2H2 ZF 160 182
ENSCSAP00000004821 C2H2 ZF 188 210
ENSCSAP00000004821 C2H2 ZF 216 238
ENSCSAP00000004821 C2H2 ZF 244 266
ENSCSAP00000004821 C2H2 ZF 272 294
ENSCSAP00000004821 C2H2 ZF 300 322
ENSCSAP00000004821 C2H2 ZF 328 350
ENSCSAP00000004821 C2H2 ZF 356 378
ENSCSAP00000004821 C2H2 ZF 384 406
ENSCSAP00000004821 C2H2 ZF 412 434
ENSCSAP00000004821 C2H2 ZF 440 462

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035743 Oryza indica BGIOSGA035743 N
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N
BRADI4G09180 Brachypodium distachyon BRADI4G09180 N
BRADI4G09190 Brachypodium distachyon BRADI4G09190 N
F775_08284 Aegilops tauschii F775_08284 N
F775_08285 Aegilops tauschii F775_08285 N
GRMZM2G073823 Zea mays GRMZM2G073823 N
LPERR11G20420 Leersia perrieri LPERR11G20420 N
MLOC_7746 Hordeum vulgare MLOC_7746 N
OB11G28100 Oryza brachyantha OB11G28100 N
OBART11G23680 Oryza barthii OBART11G23680 N
OGLUM11G22840 Oryza glumaepatula OGLUM11G22840 N
ONIVA11G23200 Oryza nivara ONIVA11G23200 N
ORGLA11G0190400 Oryza glaberrima ORGLA11G0190400 N
ORUFI11G25560 Oryza rufipogon ORUFI11G25560 N
OS11G0705900 Oryza sativa OS11G0705900 N
Pavir.Ha00317 Panicum virgatum Pavir.Ha00317 N
Pavir.J31658 Panicum virgatum Pavir.J31658 N
Pavir.J39141 Panicum virgatum Pavir.J39141 N
Sb05g027785 Sorghum bicolor Sb05g027785 N
Si026116m.g Setaria italica Si026116m.g N
Traes_4AL_977AF4963 Triticum aestivum Traes_4AL_977AF4963 N
Traes_4AL_B2CACD56E Triticum aestivum Traes_4AL_B2CACD56E N
Traes_4AL_E769BB5A6 Triticum aestivum Traes_4AL_E769BB5A6 N
Traes_4BS_2EA81743E1 Triticum aestivum Traes_4BS_2EA81743E1 N
Traes_4BS_344A932261 Triticum aestivum Traes_4BS_344A932261 N
Traes_4DS_A5CD70F30 Triticum aestivum Traes_4DS_A5CD70F30 N
Traes_4DS_C7C37A73D Triticum aestivum Traes_4DS_C7C37A73D N