bcl11ab (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000019222 T095788_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.817 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.817 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.817 0.947
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.814 0.930
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.814 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000025409 C2H2 ZF 412 433
ENSGACP00000025409 C2H2 ZF 439 461
ENSGACP00000025409 C2H2 ZF 716 738
ENSGACP00000025409 C2H2 ZF 744 766
ENSGACP00000025409 C2H2 ZF 774 797

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I 0.814
Aan_R006276 Calypte anna Aan_R006276 I 0.817
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.814
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.817
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.817
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.817
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.817
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.817
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.817
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.817
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.817
BCL11A Felis catus ENSFCAG00000027154 I 0.817
BCL11A Homo sapiens ENSG00000119866 D 0.817
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.817
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.817
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.817
BCL11A Microcebus murinus ENSMICG00000015052 I 0.817
Bcl11a Mus musculus ENSMUSG00000000861 I 0.817
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.819
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.817
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.817
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.817
BCL11A Sus scrofa ENSSSCG00000008392 I 0.817
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.817
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.817
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.817
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.817
bcl11aa Danio rerio ENSDARG00000061352 I 0.825
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.814
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.813
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.813
bcl11ab Danio rerio ENSDARG00000063153 I 0.825
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.825
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.825
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.825
BCL11B Bos taurus ENSBTAG00000018019 I 0.814
BCL11B Canis familiaris ENSCAFG00000017809 I 0.814
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.814
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.814
BCL11B Homo sapiens ENSG00000127152 D 0.814
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.814
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.814
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.814
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.814
Bcl11b Mus musculus ENSMUSG00000048251 I 0.814
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.814
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.814
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.814
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.814
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.814
BCL11B Sus scrofa ENSSSCG00000002507 I 0.814
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.814
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.808
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.806
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.803
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.803
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.803
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.761
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.817
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.814
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.814
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.817
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.818
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.814
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.814
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.814
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.817
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.817
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.814
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.814
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.817
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.817
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.814
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.814
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.806
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.825
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.819
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.803
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.827
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.817
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.817
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.814
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.809
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.811
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.813
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.803
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.825
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.817
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.810
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.814
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.814
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.806
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.825
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.813
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.814
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.814
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.817
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.814
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.817
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.817
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.814
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.817
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.816
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.814
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.806
fgenesh2_pg.scaffold_136000067 Branchiostoma floridae fgenesh2_pg.scaffold_136000067 I 0.764
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.814
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.817
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.762
im:7142702 Danio rerio ENSDARG00000067727 I 0.814
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.814
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.816
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.799
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.811
ISCW016418 Ixodes scapularis ISCW016418 I 0.783
L798_02171 Zootermopsis nevadensis L798_02171 I 0.764
LotgiG139415 Lottia gigantea LotgiG139415 I 0.768
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.790
PHUM606430 Pediculus humanus PHUM606430 I 0.773
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.814
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.817
RPRC001562 Rhodnius prolixus RPRC001562 I 0.769
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.811
SMAR003355 Strigamia maritima SMAR003355 I 0.795
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.815