ENSLACG00000003560 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000003560 T096970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.825 0.974
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.825 0.974
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.825 0.974
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003997 C2H2 ZF 344 365
ENSLACP00000003997 C2H2 ZF 371 393
ENSLACP00000003997 C2H2 ZF 705 727
ENSLACP00000003997 C2H2 ZF 733 755
ENSLACP00000003997 C2H2 ZF 763 786
ENSLACP00000003998 C2H2 ZF 408 429
ENSLACP00000003998 C2H2 ZF 435 457

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I 0.806
Aan_R006276 Calypte anna Aan_R006276 I 0.825
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.806
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.825
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.825
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.825
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.825
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.825
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.825
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.825
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.825
BCL11A Felis catus ENSFCAG00000027154 I 0.825
BCL11A Homo sapiens ENSG00000119866 D 0.825
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.825
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.825
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.825
BCL11A Microcebus murinus ENSMICG00000015052 I 0.825
Bcl11a Mus musculus ENSMUSG00000000861 I 0.825
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.827
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.825
BCL11A Otolemur garnettii ENSOGAG00000024696 N 0.822
BCL11A Pan troglodytes ENSPTRG00000011944 N 0.822
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.825
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.825
BCL11A Sus scrofa ENSSSCG00000008392 I 0.825
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.825
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.825
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.825
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.825
bcl11a.L Xenopus laevis XB-GENE-865631 N 0.822
bcl11aa Danio rerio ENSDARG00000061352 I 0.817
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.806
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.805
bcl11aa Tetraodon nigroviridis ENSTNIG00000004033 N 0.778
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.805
bcl11ab Danio rerio ENSDARG00000063153 I 0.817
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.819
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.817
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.817
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.817
BCL11B Bos taurus ENSBTAG00000018019 I 0.806
BCL11B Canis familiaris ENSCAFG00000017809 I 0.806
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.806
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.806
BCL11B Homo sapiens ENSG00000127152 D 0.806
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.806
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.806
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.806
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.806
Bcl11b Mus musculus ENSMUSG00000048251 I 0.806
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.806
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.806
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.806
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.806
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.806
BCL11B Sus scrofa ENSSSCG00000002507 I 0.806
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.806
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.800
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.814
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.811
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.811
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.811
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.769
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.825
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.806
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.806
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.825
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.810
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.806
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.806
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.806
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.825
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.825
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.806
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.806
ENSECAG00000008094 Equus caballus ENSECAG00000008094 N 0.822
ENSFALG00000002563 Ficedula albicollis ENSFALG00000002563 N 0.802
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.825
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.825
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.806
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.806
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.814
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.817
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.811
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.819
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.825
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.825
ENSMODG00000002114 Monodelphis domestica ENSMODG00000002114 N 0.822
ENSMPUG00000003031 Mustela putorius furo ENSMPUG00000003031 N 0.802
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.806
ENSOARG00000001663 Ovis aries ENSOARG00000001663 N 0.822
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.802
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.803
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.805
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.811
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.817
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.825
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.802
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.806
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.806
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.814
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.817
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.805
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.806
ENSPPYG00000012393 Pongo abelii ENSPPYG00000012393 N 0.822
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.806
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.825
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.806
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.825
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.825
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.806
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.825
ENSXMAG00000004749 Xiphophorus maculatus ENSXMAG00000004749 N 0.807
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.808
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.806
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.814
fgenesh2_pg.scaffold_136000067 Branchiostoma floridae fgenesh2_pg.scaffold_136000067 I 0.772
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.806
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.825
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.762
im:7142702 Danio rerio ENSDARG00000067727 I 0.806
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.806
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.808
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.791
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.807
ISCW016418 Ixodes scapularis ISCW016418 I 0.775
L798_02171 Zootermopsis nevadensis L798_02171 I 0.756
LotgiG139415 Lottia gigantea LotgiG139415 I 0.760
Myotis_brandtii_Bcl11a_10034311 Myotis brandtii Myotis_brandtii_Bcl11a_10034311 N 0.822
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.783
PHUM606430 Pediculus humanus PHUM606430 I 0.765
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.806
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.825
RPRC001562 Rhodnius prolixus RPRC001562 I 0.761
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.803
SMAR003355 Strigamia maritima SMAR003355 I 0.787
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.823