ENSPSIG00000004550 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000004550 T107490_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIVEP2
M10101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIBP1_Q6 		0.780 0.880
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000004867 C2H2 ZF 378 400
ENSPSIP00000004867 C2H2 ZF 406 428
ENSPSIP00000004867 C2H2 ZF 2023 2045
ENSPSIP00000004867 C2H2 ZF 2051 2075

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006532 Ricinus communis 30169.m006532 N 0.000
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.000
Bo7g097160 Brassica oleracea Bo7g097160 N 0.000
Bo9g013770 Brassica oleracea Bo9g013770 N 0.000
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.000
Bra026466 Brassica rapa Bra026466 N 0.000
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.000
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.000
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.000
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.000
Ca_03953 Cicer arietinum Ca_03953 N 0.000
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.000
Cla004302 Citrullus lanatus Cla004302 N 0.000
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.000
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.000
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.000
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.000
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.000
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.000
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.000
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.000
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.000
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.000
MDP0000831937 Malus domestica MDP0000831937 N 0.000
mgf001401m Mimulus guttatus mgf001401m N 0.000
mgf006107m Mimulus guttatus mgf006107m N 0.000
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.000
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.000
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.000
PK06897.1 Cannabis sativa PK06897.1 N 0.000
Pm019782 Prunus mume Pm019782 N 0.000
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.000
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.000
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.000
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.000
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.000
SIGE Arabidopsis thaliana AT5G24120 N 0.000
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.000
SIGE Vitis vinifera VIT_16s0050g02520 N 0.000
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.000
TCM_015349 Theobroma cacao TCM_015349 N 0.000
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.000