Zfp28 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000042777 T109237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP28
M08378_2.00 		Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND		 ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE 		0.758 0.914
ZFP28
M08949_2.00 		Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR		 Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C 		0.758 0.914
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000020523 C2H2 ZF 273 295
ENSRNOP00000020523 C2H2 ZF 301 323
ENSRNOP00000020523 C2H2 ZF 329 352
ENSRNOP00000020523 C2H2 ZF 358 380
ENSRNOP00000020523 C2H2 ZF 386 408
ENSRNOP00000020523 C2H2 ZF 414 436
ENSRNOP00000020523 C2H2 ZF 442 464
ENSRNOP00000020523 C2H2 ZF 470 492
ENSRNOP00000020523 C2H2 ZF 498 520
ENSRNOP00000020523 C2H2 ZF 526 548
ENSRNOP00000020523 C2H2 ZF 554 576
ENSRNOP00000020523 C2H2 ZF 582 604
ENSRNOP00000020523 C2H2 ZF 610 632
ENSRNOP00000020523 C2H2 ZF 638 660

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006598 Calypte anna Aan_R006598 I 0.000
Afo_R014608 Aptenodytes forsteri Afo_R014608 I 0.000
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I 0.000
ARNTL Myotis lucifugus ENSMLUG00000008503 I 0.000
ARNTL Gallus gallus ENSGALG00000005378 I 0.000
ARNTL Gorilla gorilla ENSGGOG00000013211 I 0.000
ARNTL Sus scrofa ENSSSCG00000013397 I 0.000
ARNTL Loxodonta africana ENSLAFG00000026673 I 0.000
Arntl Rattus norvegicus ENSRNOG00000014448 D 0.000
ARNTL Meleagris gallopavo ENSMGAG00000005349 I 0.000
ARNTL Pteropus vampyrus ENSPVAG00000006712 I 0.000
ARNTL Felis catus ENSFCAG00000010983 I 0.000
ARNTL Macaca mulatta ENSMMUG00000009690 I 0.000
ARNTL Monodelphis domestica ENSMODG00000008708 I 0.000
ARNTL Pan troglodytes ENSPTRG00000003376 I 0.000
Arntl Mus musculus ENSMUSG00000055116 D 0.000
ARNTL Ochotona princeps ENSOPRG00000004853 I 0.000
ARNTL Otolemur garnettii ENSOGAG00000000736 I 0.000
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I 0.000
ARNTL Tupaia belangeri ENSTBEG00000017387 I 0.000
ARNTL Homo sapiens ENSG00000133794 D 0.000
ARNTL Tursiops truncatus ENSTTRG00000013925 I 0.000
ARNTL Equus caballus ENSECAG00000012118 I 0.000
Arntl Dipodomys ordii ENSDORG00000015539 I 0.000
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I 0.000
ARNTL Vicugna pacos ENSVPAG00000005926 I 0.000
ARNTL Cavia porcellus ENSCPOG00000008795 I 0.000
ARNTL Callithrix jacchus ENSCJAG00000010162 I 0.000
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I 0.000
ARNTL Canis familiaris ENSCAFG00000008095 I 0.000
ARNTL Bos taurus ENSBTAG00000013029 I 0.000
arntl Xenopus tropicalis XB-GENE-495455 I 0.000
ARNTL Anolis carolinensis ENSACAG00000004497 I 0.000
arntl.L Xenopus laevis XB-GENE-17342306 I 0.000
arntl.S Xenopus laevis XB-GENE-495459 I 0.000
arntl1a Danio rerio ENSDARG00000006791 I 0.000
arntl1a Oryzias latipes ENSORLG00000019370 I 0.000
arntl1a Takifugu rubripes ENSTRUG00000008391 I 0.000
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I 0.000
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I 0.000
arntl1b Danio rerio ENSDARG00000035732 I 0.000
Brh_R010633 Buceros rhinoceros Brh_R010633 I 0.000
CGI_10025278 Crassostrea gigas CGI_10025278 I 0.000
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I 0.000
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I 0.000
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I 0.000
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I 0.000
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I 0.000
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I 0.000
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I 0.000
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I 0.000
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I 0.000
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I 0.000
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I 0.000
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I 0.000
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I 0.000
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I 0.000
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I 0.000
ENSP00000384517 Macaca fascicularis ENSP00000384517 I 0.000
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I 0.000
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I 0.000
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I 0.000
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I 0.000
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I 0.000
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I 0.000
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I 0.000
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I 0.000
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I 0.000
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I 0.000
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I 0.000
Gfo_R013617 Geospiza fortis Gfo_R013617 I 0.000
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I 0.000
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I 0.000
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I 0.000
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I 0.000
Ogr18318 Ophisaurus gracilis Ogr18318 I 0.000
Pvit_10294 Pogona vitticeps Pvit_10294 I 0.000
Tal_R003521 Tyto alba Tal_R003521 I 0.000
tetur08g07430 Tetranychus urticae tetur08g07430 N 0.000