LOC100911224 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000046455 T109257_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZIK1
M07633_2.00 		Homo sapiens
VNNWYBYNKTGCYWTTGYYHY
RDRRCAAWRGCAMNRVRWNNB		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZIK1.RCADE.ReprocessedData 		0.807 0.932
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000066382 C2H2 ZF 212 234
ENSRNOP00000066382 C2H2 ZF 240 262
ENSRNOP00000066382 C2H2 ZF 268 290
ENSRNOP00000066382 C2H2 ZF 296 318
ENSRNOP00000066382 C2H2 ZF 324 346
ENSRNOP00000066382 C2H2 ZF 352 374
ENSRNOP00000066382 C2H2 ZF 380 402
ENSRNOP00000066382 C2H2 ZF 408 430
ENSRNOP00000066382 C2H2 ZF 436 458

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIS002444 Anopheles sinensis ASIS002444 N 0.000
GH16346 Drosophila grimshawi FBgn0123817 N 0.000
LLOJ002427 Lutzomyia longipalpis LLOJ002427 N 0.000
LLOJ003838 Lutzomyia longipalpis LLOJ003838 N 0.000
RSKR_0001081900 Rhabditophanes kr3021 RSKR_0001081900 N 0.000