GM13768 (Drosophila sechellia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0168699 T116021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CTCF
M08193_2.00 		Drosophila melanogaster
GCGCCAYCTR
YAGRTGGCGC		 ChIP-seq
Contrino et al.(2012)
Mf5 		0.827 0.996
CTCF
M08194_2.00 		Drosophila melanogaster
DNKGSCGCCAV
BTGGCGSCMNH		 ChIP-seq
Contrino et al.(2012)
Mf6 		0.827 0.996
CTCF
M08413_2.00 		Drosophila melanogaster
RGCGCCAYCTRBBKN
NMVVYAGRTGGCGCY		 ChIP-chip
Mathelier et al.(2014)
MA0531.1 		0.827 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0195245 C2H2 ZF 293 315
FBpp0195245 C2H2 ZF 321 343
FBpp0195245 C2H2 ZF 349 372
FBpp0195245 C2H2 ZF 406 428
FBpp0195245 C2H2 ZF 434 456
FBpp0195245 C2H2 ZF 464 487
FBpp0195245 C2H2 ZF 493 515
FBpp0195245 C2H2 ZF 521 543
FBpp0195245 C2H2 ZF 549 572
FBpp0195245 C2H2 ZF 586 608

Links

Other C2H2 ZF family TFs
Other Drosophila sechellia TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr2.CM0304.660.nd Lotus japonicus chr2.CM0304.660.nd N
Cucsa.041590 Cucumis sativus Cucsa.041590 N
gene32380-v1.0-hybrid Fragaria vesca gene32380-v1.0-hybrid N
GLYMA01G42510 Glycine max GLYMA01G42510 N
GLYMA05G03540 Glycine max GLYMA05G03540 N
GLYMA17G14100 Glycine max GLYMA17G14100 N
MDP0000400129 Malus domestica MDP0000400129 N
Pm023766 Prunus mume Pm023766 I
Pm023767 Prunus mume Pm023767 N
Pm023770 Prunus mume Pm023770 N
POPTR_0001s08740 Populus trichocarpa POPTR_0001s08740 N
PRUPE_ppa016829mg Prunus persica PRUPE_ppa016829mg N
PRUPE_ppa017269mg Prunus persica PRUPE_ppa017269mg N
PRUPE_ppa021384mg Prunus persica PRUPE_ppa021384mg N
PRUPE_ppa022712mg Prunus persica PRUPE_ppa022712mg N
PRUPE_ppa026499mg Prunus persica PRUPE_ppa026499mg I
SapurV1A.0282s0060 Salix purpurea SapurV1A.0282s0060 N
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I
VIT_16s0100g00400 Vitis vinifera VIT_16s0100g00400 I