CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene32380-v1.0-hybrid
(
Fragaria vesca
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
gene32380-v1.0-hybrid
T008454_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna32380.1-v1.0-hybrid
AP2
99
149
PRYRGIRCRGEKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVAALALKRE
Links
Other
AP2
family TFs
Other
Fragaria vesca
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000400129
Malus domestica
MDP0000400129
N
0.761
PRUPE_ppa026499mg
Prunus persica
PRUPE_ppa026499mg
I
0.752
Pm023766
Prunus mume
Pm023766
I
0.752
PRUPE_ppa022712mg
Prunus persica
PRUPE_ppa022712mg
N
0.746
Pm023768
Prunus mume
Pm023768
N
0.746
PRUPE_ppa021384mg
Prunus persica
PRUPE_ppa021384mg
N
0.742
Pm023767
Prunus mume
Pm023767
N
0.742
VIT_16s0100g00400
Vitis vinifera
VIT_16s0100g00400
I
0.731
Thhalv10023678m.g
Eutrema salsugineum
Thhalv10023678m.g
I
0.731
Cucsa.041590
Cucumis sativus
Cucsa.041590
N
0.729
SapurV1A.0282s0060
Salix purpurea
SapurV1A.0282s0060
N
0.708
POPTR_0001s08740
Populus trichocarpa
POPTR_0001s08740
N
0.706
GLYMA01G42510
Glycine max
GLYMA01G42510
N
0.703
chr2.CM0304.660.nd
Lotus japonicus
chr2.CM0304.660.nd
N
0.694