CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.041590
(
Cucumis sativus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cucsa.041590
T006986_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.041590.1
AP2
3
53
DHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGC
Links
Other
AP2
family TFs
Other
Cucumis sativus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm023766
Prunus mume
Pm023766
I
0.743
PRUPE_ppa026499mg
Prunus persica
PRUPE_ppa026499mg
I
0.743
PRUPE_ppa022712mg
Prunus persica
PRUPE_ppa022712mg
N
0.741
Pm023768
Prunus mume
Pm023768
N
0.741
Thhalv10023678m.g
Eutrema salsugineum
Thhalv10023678m.g
I
0.739
MDP0000400129
Malus domestica
MDP0000400129
N
0.738
PRUPE_ppa021384mg
Prunus persica
PRUPE_ppa021384mg
N
0.737
Pm023767
Prunus mume
Pm023767
N
0.737
VIT_16s0100g00400
Vitis vinifera
VIT_16s0100g00400
I
0.730
gene32380-v1.0-hybrid
Fragaria vesca
gene32380-v1.0-hybrid
N
0.729
Cla004491
Citrullus lanatus
Cla004491
I
0.724
SapurV1A.0282s0060
Salix purpurea
SapurV1A.0282s0060
N
0.710
POPTR_0001s08740
Populus trichocarpa
POPTR_0001s08740
N
0.710
chr2.CM0304.660.nd
Lotus japonicus
chr2.CM0304.660.nd
N
0.701
GLYMA01G42510
Glycine max
GLYMA01G42510
N
0.690
GLYMA17G14100
Glycine max
GLYMA17G14100
N
0.681
GLYMA05G03540
Glycine max
GLYMA05G03540
N
0.681