CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000400129
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000400129
T009114_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000400129
AP2
90
140
PRYRGIRCRGGKWVSEIREPRKTKRIWLGTFPTPEMAAAAYDVAALTLKGT
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene32380-v1.0-hybrid
Fragaria vesca
gene32380-v1.0-hybrid
N
0.761
PRUPE_ppa026499mg
Prunus persica
PRUPE_ppa026499mg
I
0.758
Pm023766
Prunus mume
Pm023766
I
0.758
PRUPE_ppa022712mg
Prunus persica
PRUPE_ppa022712mg
N
0.751
Pm023768
Prunus mume
Pm023768
N
0.751
PRUPE_ppa021384mg
Prunus persica
PRUPE_ppa021384mg
N
0.748
Pm023767
Prunus mume
Pm023767
N
0.748
Cucsa.041590
Cucumis sativus
Cucsa.041590
N
0.738
Thhalv10023678m.g
Eutrema salsugineum
Thhalv10023678m.g
I
0.736
VIT_16s0100g00400
Vitis vinifera
VIT_16s0100g00400
I
0.727
POPTR_0001s08740
Populus trichocarpa
POPTR_0001s08740
N
0.711
SapurV1A.0282s0060
Salix purpurea
SapurV1A.0282s0060
N
0.710
chr2.CM0304.660.nd
Lotus japonicus
chr2.CM0304.660.nd
N
0.698
GLYMA01G42510
Glycine max
GLYMA01G42510
N
0.690
PRUPE_ppa017269mg
Prunus persica
PRUPE_ppa017269mg
N
0.681
Pm023770
Prunus mume
Pm023770
N
0.681