KLLA0_C17072g (Kluyveromyces lactis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 KLLA0_C17072g T120680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_C17072g
M01038_2.00		 Kluyveromyces lactis
CYCCTDDNN
NNHHAGGRG		 PBM
Siggers et al.(2014)
KLL0C17072gKlac		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
COM2
M00024_2.00 		Saccharomyces cerevisiae
VCCCCTDT
AHAGGGGB		 PBM
Badis et al.(2008)
YER130C_2103 		0.771 0.804
COM2
M01530_2.00 		Saccharomyces cerevisiae
YYYYKNWHN
NDWNMRRRR		 PBM
Zhu et al.(2009)
Yer130c 		0.771 0.804
COM2
M07454_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1 		0.771 0.804
COM2
M08521_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 Misc
DeBoer et al.(2011)
YER130C_534 		0.771 0.804
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01038_2.00 C2H2 ZF 18 41
M01038_2.00 C2H2 ZF 47 69

DNA Binding Domains

Protein ID Domain From To Sequence
CAH01814 C2H2 ZF 418 441
CAH01814 C2H2 ZF 447 469

Links

Other C2H2 ZF family TFs
Other Kluyveromyces lactis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N
AT2G44730 Arabidopsis thaliana AT2G44730 N
Bo3g037360 Brassica oleracea Bo3g037360 N
Bo4g023990 Brassica oleracea Bo4g023990 N
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N
Bra000360 Brassica rapa Bra000360 N
Bra004859 Brassica rapa Bra004859 N
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N
Carubv10025047m.g Capsella rubella Carubv10025047m.g N
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N
Ca_06067 Cicer arietinum Ca_06067 N
Ca_06795 Cicer arietinum Ca_06795 N
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N
Cla021714 Citrullus lanatus Cla021714 N
Cucsa.256710 Cucumis sativus Cucsa.256710 N
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N
GLYMA08G05630 Glycine max GLYMA08G05630 N
GLYMA09G38050 Glycine max GLYMA09G38050 N
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N
MDP0000271048 Malus domestica MDP0000271048 N
MDP0000557282 Malus domestica MDP0000557282 N
mgf005560m Mimulus guttatus mgf005560m N
MTR_4g117990 Medicago truncatula MTR_4g117990 N
MTR_7g081190 Medicago truncatula MTR_7g081190 N
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N
PK17306.1 Cannabis sativa PK17306.1 N
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N
TCM_005773 Theobroma cacao TCM_005773 N
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N