NV16451 (Nasonia vitripennis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 NV16451 T124435_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.764 0.867
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.764 0.867
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.764 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NV16451-PA C2H2 ZF 202 224
NV16451-PA C2H2 ZF 234 255
NV16451-PA C2H2 ZF 259 281
NV16451-PA C2H2 ZF 287 309
NV16451-PA C2H2 ZF 315 336

Links

Other C2H2 ZF family TFs
Other Nasonia vitripennis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000735 Ricinus communis 29814.m000735 I 0.000
Bra000177 Brassica rapa Bra000177 I 0.000
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I 0.000
Ca_13402 Cicer arietinum Ca_13402 I 0.000
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I 0.000
Ciclev10032356m.g Citrus clementina Ciclev10032356m.g I 0.000
Cla006707 Citrullus lanatus Cla006707 I 0.000
Cucsa.136730 Cucumis sativus Cucsa.136730 I 0.000
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I 0.000
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I 0.000
fgenesh2_kg.108__1__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.108__1__AT2G40200.1 I 0.000
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I 0.000
GLYMA02G42570 Glycine max GLYMA02G42570 I 0.000
GLYMA11G35480 Glycine max GLYMA11G35480 I 0.000
GLYMA18G02940 Glycine max GLYMA18G02940 I 0.000
Gorai.011G292100 Gossypium raimondii Gorai.011G292100 I 0.000
Gorai.012G078100 Gossypium raimondii Gorai.012G078100 I 0.000
Lus10028978.g Linum usitatissimum Lus10028978.g I 0.000
MTR_3g070970 Medicago truncatula MTR_3g070970 I 0.000
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I 0.000
PGSC0003DMG400015659 Solanum tuberosum PGSC0003DMG400015659 I 0.000
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I 0.000
PK01630.1 Cannabis sativa PK01630.1 D 0.000
Pm018950 Prunus mume Pm018950 I 0.000
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I 0.000
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I 0.000
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I 0.000
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I 0.000
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I 0.000
TCM_042475 Theobroma cacao TCM_042475 I 0.000
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I 0.000