TC002803 (Tribolium castaneum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TC002803 T129949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.773 0.850
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.773 0.850
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.773 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC002803-PA C2H2 ZF 128 150
TC002803-PA C2H2 ZF 160 181
TC002803-PA C2H2 ZF 185 207
TC002803-PA C2H2 ZF 213 235
TC002803-PA C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Tribolium castaneum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I 0.000
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I 0.000
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I 0.000
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I 0.000
ENSP00000409107 Macaca fascicularis ENSP00000409107 I 0.000
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I 0.000
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I 0.000
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I 0.000
Ogr11588 Ophisaurus gracilis Ogr11588 I 0.000
Pvit_02527 Pogona vitticeps Pvit_02527 I 0.000
ZBTB42 Gallus gallus ENSGALG00000023025 I 0.000
ZBTB42 Meleagris gallopavo ENSMGAG00000015389 I 0.000
ZBTB42 Monodelphis domestica ENSMODG00000013701 I 0.000
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I 0.000
zbtb42 Oryzias latipes ENSORLG00000017008 I 0.000
ZBTB42 Anolis carolinensis ENSACAG00000011451 I 0.000
ZBTB42 Pan troglodytes ENSPTRG00000040287 I 0.000
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I 0.000
zbtb42 Takifugu rubripes ENSTRUG00000013592 I 0.000
ZBTB42 Homo sapiens ENSG00000179627 D 0.000
zbtb42 Danio rerio ENSDARG00000102761 I 0.000
znf238.2 Xenopus tropicalis XB-GENE-1219066 I 0.000