VDAG_04227 (Verticillium dahliae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDAG_04227 T131329_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
msn-1
M01192_2.00 		Neurospora crassa
VCCCCTDW
WHAGGGGB		 PBM
Lambert et al.(2019)
pTH8923 		0.761 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY22789 C2H2 ZF 458 481
EGY22789 C2H2 ZF 487 509

Links

Other C2H2 ZF family TFs
Other Verticillium dahliae TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I
Bo1g024080 Brassica oleracea Bo1g024080 I
Bo3g162600 Brassica oleracea Bo3g162600 I
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I
Bra013519 Brassica rapa Bra013519 I
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I
Carubv10007380m.g Capsella rubella Carubv10007380m.g I
chr4.CM1616.440.nc Lotus japonicus chr4.CM1616.440.nc I
DYT1 Arabidopsis thaliana AT4G21330 D
GLYMA13G32370 Glycine max GLYMA13G32370 I
GLYMA15G06950 Glycine max GLYMA15G06950 I
LjT46I09.60.nd Lotus japonicus LjT46I09.60.nd I
MTR_4g091910 Medicago truncatula MTR_4g091910 I
orange1.1g042649m.g Citrus sinensis orange1.1g042649m.g I
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I