VIT_08s0040g00750 (Vitis vinifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VIT_08s0040g00750 T131470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.769 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0040g00750.t01 C2H2 ZF 72 94

Links

Other C2H2 ZF family TFs
Other Vitis vinifera TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000908 Ricinus communis 29661.m000908 I 0.000
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.000
BGIOSGA026045 Oryza indica BGIOSGA026045 N 0.000
BRADI1G22940 Brachypodium distachyon BRADI1G22940 N 0.000
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.000
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.000
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.000
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.000
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.000
GRMZM2G089557 Zea mays GRMZM2G089557 N 0.000
GRMZM2G455889 Zea mays GRMZM2G455889 I 0.000
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.000
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.000
LPERR07G17860 Leersia perrieri LPERR07G17860 N 0.000
ONIVA07G18980 Oryza nivara ONIVA07G18980 N 0.000
ORUFI07G21440 Oryza rufipogon ORUFI07G21440 N 0.000
OS07G0588600 Oryza sativa OS07G0588600 N 0.000
Pavir.J16973 Panicum virgatum Pavir.J16973 N 0.000
Sb02g038000 Sorghum bicolor Sb02g038000 N 0.000
Traes_2BS_DD07C2EE6 Triticum aestivum Traes_2BS_DD07C2EE6 N 0.000