CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G089557
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G089557
T118580_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G089557_P01
C2H2 ZF
95
117
YECSVCGKVYTSYQALGGHKTSH
GRMZM2G089557_P01
C2H2 ZF
154
176
HRCSVCKRTFQSGQALGGHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026045
Oryza indica
BGIOSGA026045
N
0.821
BRADI1G22940
Brachypodium distachyon
BRADI1G22940
N
0.821
ONIVA07G18980
Oryza nivara
ONIVA07G18980
N
0.821
ORUFI07G21440
Oryza rufipogon
ORUFI07G21440
N
0.821
OS07G0588600
Oryza sativa
OS07G0588600
N
0.821
Sb02g038000
Sorghum bicolor
Sb02g038000
N
0.797
Traes_2BS_DD07C2EE6
Triticum aestivum
Traes_2BS_DD07C2EE6
N
0.797
Pavir.J15304
Panicum virgatum
Pavir.J15304
N
0.797
Pavir.J16973
Panicum virgatum
Pavir.J16973
N
0.797
LPERR07G17860
Leersia perrieri
LPERR07G17860
N
0.792
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
0.778
OB03G42170
Oryza brachyantha
OB03G42170
I
0.772
29661.m000908
Ricinus communis
29661.m000908
I
0.758
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.757