CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2BS_DD07C2EE6
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_2BS_DD07C2EE6
T130548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BS_DD07C2EE6.2
C2H2 ZF
90
112
YECSVCGKVYASYQALGGHKTSH
Traes_2BS_DD07C2EE6.2
C2H2 ZF
139
161
HQCSLCHRKFPSGQALGGHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g038000
Sorghum bicolor
Sb02g038000
N
0.827
Pavir.J15304
Panicum virgatum
Pavir.J15304
N
0.827
Pavir.J16973
Panicum virgatum
Pavir.J16973
N
0.827
BRADI1G22940
Brachypodium distachyon
BRADI1G22940
N
0.803
BGIOSGA026045
Oryza indica
BGIOSGA026045
N
0.797
GRMZM2G089557
Zea mays
GRMZM2G089557
N
0.797
ONIVA07G18980
Oryza nivara
ONIVA07G18980
N
0.797
ORUFI07G21440
Oryza rufipogon
ORUFI07G21440
N
0.797
OS07G0588600
Oryza sativa
OS07G0588600
N
0.797
GSMUA_Achr2G13410_001
Musa acuminata
GSMUA_Achr2G13410_001
I
0.773
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
0.772
LPERR07G17860
Leersia perrieri
LPERR07G17860
N
0.768
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
0.762
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
0.762
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
0.762
GRMZM2G455889
Zea mays
GRMZM2G455889
I
0.761
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
0.758
29661.m000908
Ricinus communis
29661.m000908
I
0.758
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.757
Cucsa.219210
Cucumis sativus
Cucsa.219210
I
0.757