CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
klu-2
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00022592
T131643_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-2
M00645_2.00
Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN
PBM
Narasimhan et al.(2015)
pTH9354
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00645_2.00
C2H2 ZF
51
73
YYCFICEKDFRRPDILSRHTRRH
M00645_2.00
C2H2 ZF
79
101
FKCEDCGRFFSRSDHLRTHRRTH
M00645_2.00
C2H2 ZF
107
130
YHCCVCNYSARRRDVLTRHMSTRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZC328.2
C2H2 ZF
247
269
YYCFICEKDFRRPDILSRHTRRH
ZC328.2
C2H2 ZF
275
297
FKCEDCGRFFSRSDHLRTHRRTH
ZC328.2
C2H2 ZF
303
326
YHCCVCNYSARRRDVLTRHMSTRH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_17930
Ancylostoma caninum
ANCCAN_17930
I
0.777
ANCCEY_13832
Ancylostoma ceylanicum
ANCCEY_13832
I
0.777
ASU_05504
Ascaris suum
ASU_05504
I
0.763
BXY_0680200
Bursaphelenchus xylophilus
BXY_0680200
I
0.761
CBG12610
Caenorhabditis briggsae
CBG12610
I
0.827
CBN10213
Caenorhabditis brenneri
CBN10213
I
0.827
CBN19187
Caenorhabditis brenneri
CBN19187
I
0.827
CJA33261
Caenorhabditis japonica
CJA33261
I
0.824
CRE07023
Caenorhabditis remanei
CRE07023
I
0.827
HCOI01254700
Haemonchus contortus
HCOI01254700
I
0.777
HPLM_0001133101
Haemonchus placei
HPLM_0001133101
I
0.777
L596_g11489
Steinernema carpocapsae
L596_g11489
I
0.764
L889_g28325
Steinernema feltiae
L889_g28325
I
0.764
L893_g30492
Steinernema glaseri
L893_g30492
I
0.764
L898_g6014
Steinernema monticolum
L898_g6014
I
0.761
TCNE_0000622401
Toxocara canis
TCNE_0000622401
I
0.764
TELCIR_01018
Teladorsagia circumcincta
TELCIR_01018
I
0.777