bnc-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00044791 T131651_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bnc-1
M00648_2.00		 Caenorhabditis elegans
YGTCVHNNN
NNNDBGACR		 PBM
Narasimhan et al.(2015)
pTH10026		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00648_2.00 C2H2 ZF 51 73
M00648_2.00 C2H2 ZF 78 101

DNA Binding Domains

Protein ID Domain From To Sequence
F55C5.11 C2H2 ZF 108 130
F55C5.11 C2H2 ZF 135 158

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013374 Aedes aegypti AAEL013374 N
AEPI009424 Anopheles epiroticus AEPI009424 N
AMAM014362 Anopheles maculatus AMAM014362 N
BTMF_0001429901 Brugia timori BTMF_0001429901 N
BXY_1034900 Bursaphelenchus xylophilus BXY_1034900 I 0.771
BXY_1035000 Bursaphelenchus xylophilus BXY_1035000 N
CLEC006296 Cimex lectularius CLEC006296 N
D917_04255 Trichinella nativa D917_04255 N
D918_00954 Trichuris suis D918_00954 N
EFV52039 Trichinella spiralis EFV52039 N
GF17143 Drosophila ananassae FBgn0094162 N
GF17175 Drosophila ananassae FBgn0094193 N
GH12158 Drosophila grimshawi FBgn0119637 N
GI10902 Drosophila mojavensis FBgn0133665 N
GJ18548 Drosophila virilis FBgn0205706 N
HHAL001513-PA Halyomorpha halys HHAL001513-PA N
HMEL014400 Heliconius melpomene HMEL014400 N
ISCW018372 Ixodes scapularis ISCW018372 N
KGM_20032 Danaus plexippus KGM_20032 N
L893_g32898 Steinernema glaseri L893_g32898 N
LCUP009247 Lucilia cuprina LCUP009247 N
MCINX008008 Melitaea cinxia MCINX008008 N
MDOA010514 Musca domestica MDOA010514 N
nRc.2.0.1.g39124 Romanomermis culicivorax nRc.2.0.1.g39124 N
PTRK_0001274900 Parastrongyloides trichosuri PTRK_0001274900 N
RPRC004296 Rhodnius prolixus RPRC004296 N
scaffold1098-EXSNAP2012.1 Pristionchus exspectatus scaffold1098-EXSNAP2012.1 N
TC001693 Tribolium castaneum TC001693 N
TTRE_0000574401 Trichuris trichiura TTRE_0000574401 N