estExt_fgenesh1_pg.C_chr_6.10408 (Pichia stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_chr_6.10408 T138544_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.723
M01037_2.00 		Candida albicans
VCCCCTKD
HMAGGGGB		 PBM
Siggers et al.(2014)
Bcr1_Orf19.723Calb 		0.803 0.978
HCBG_02507
M01447_2.00 		Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN		 PBM
Najafabadi et al.(2015a)
pTH10217 		0.760 0.761
NCU05064
M01883_2.00 		Neurospora crassa
NNYMCCTKD
HMAGGKRNN		 PBM
Weirauch et al.(2014)
pTH8949 		0.760 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_chr_6.10408 C2H2 ZF 41 66
estExt_fgenesh1_pg.C_chr_6.10408 C2H2 ZF 72 95

Links

Other C2H2 ZF family TFs
Other Pichia stipitis TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002381 Aedes aegypti AAEL002381 N 0.000
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACEP16621 Atta cephalotes ACEP16621 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
BTMF_0000420901 Brugia timori BTMF_0000420901 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
CBN04053 Caenorhabditis brenneri CBN04053 N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.000
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.000
GPUH_0002275001 Gongylonema pulchrum GPUH_0002275001 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g6592 Steinernema feltiae L889_g6592 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
TCLT_0000071201 Thelazia callipaeda TCLT_0000071201 N 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.000