CBN04053 (Caenorhabditis brenneri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBN04053 T326891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN04053 Sox 28 71

Links

Other Sox family TFs
Other Caenorhabditis brenneri TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.721
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.683
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.659
LOAG_08062 Loa loa LOAG_08062 N 0.659
GPUH_0002275001 Gongylonema pulchrum GPUH_0002275001 N 0.621
TCLT_0000071201 Thelazia callipaeda TCLT_0000071201 N 0.621
CBG20663 Caenorhabditis briggsae CBG20663 N 0.598
BTMF_0000420901 Brugia timori BTMF_0000420901 N 0.595
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.569
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.569
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.569
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.507
Si007288m.g Setaria italica Si007288m.g I 0.500
CRE11852 Caenorhabditis remanei CRE11852 N 0.494
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.494
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.493
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.493
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.493
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.492
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.492
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.492
CJA04355 Caenorhabditis japonica CJA04355 N 0.489
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.484
ASU_05994 Ascaris suum ASU_05994 N 0.481
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.481
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.481
L889_g9094 Steinernema feltiae L889_g9094 N 0.481
L892_g19058 Steinernema scapterisci L892_g19058 N 0.481
L893_g29974 Steinernema glaseri L893_g29974 N 0.481
L898_g4830 Steinernema monticolum L898_g4830 N 0.481
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.481
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.481
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.478
ASIS014204 Anopheles sinensis ASIS014204 N 0.478
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.478
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.478
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.477
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.477
0600010013 Ostreococcus tauri 0600010013 I 0.475
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.475
ASU_09087 Ascaris suum ASU_09087 N 0.475
PPA12247 Pristionchus pacificus PPA12247 N 0.471
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.466
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.466
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.466
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.466
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.466
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.466
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.466
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.466
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.463
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.460
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.460
NECAME_17555 Necator americanus NECAME_17555 N 0.460
NECAME_17981 Necator americanus NECAME_17981 N 0.460
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.451
L892_g23618 Steinernema scapterisci L892_g23618 N 0.451
L893_g23503 Steinernema glaseri L893_g23503 N 0.451
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.449
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.448
L889_g16198 Steinernema feltiae L889_g16198 N 0.448
L898_g7743 Steinernema monticolum L898_g7743 N 0.446
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.445
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.443
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.440
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.439
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.439
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.439
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.439
TCM_018380 Theobroma cacao TCM_018380 I 0.433
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.430
mgf012563m Mimulus guttatus mgf012563m I 0.427
Minc03634 Meloidogyne incognita Minc03634 N 0.425
Minc04648 Meloidogyne incognita Minc04648 N 0.425
Hsal_03836--NA Harpegnathos saltator Hsal_03836--NA N 0.423
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.423
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.420
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.420
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.420
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.420
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.415