gw1.23.155.1 (Phycomyces blakesleeanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.23.155.1 T140052_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.792 0.822
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.23.155.1 C2H2 ZF 17 39
gw1.23.155.1 C2H2 ZF 46 69

Links

Other C2H2 ZF family TFs
Other Phycomyces blakesleeanus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_09674 Phytophthora parasitica F443_09674 N
fgenesh_scip_prom.28083.7556 Phytophthora lateralis fgenesh_scip_prom.28083.7556 N
HpaG807764 Hyaloperonospora arabidopsidis HpaG807764 N
maker-pag1_scaffold_106-fgenesh-gene-0.12 Pythium aphanidermatum maker-pag1_scaffold_106-fgenesh-gene-0.12 N
maker-par_contig_313-fgenesh-gene-0.2 Pythium arrhenomanes maker-par_contig_313-fgenesh-gene-0.2 N
maker-piw_contig_1064-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_1064-fgenesh-gene-0.2 N
maker-pve_contig_7-fgenesh-gene-0.20 Pythium vexans maker-pve_contig_7-fgenesh-gene-0.20 N
Phyra85385 Phytophthora ramorum Phyra85385 N
Physo134456 Phytophthora sojae Physo134456 N
PITG_19220 Phytophthora infestans PITG_19220 N
PYU1_G014859 Pythium ultimum PYU1_G014859 N
SPRG_07821 Saprolegnia parasitica SPRG_07821 N