CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LDEC009536 *(Leptinotarsa decemlineata)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	LDEC009536	T144650_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ovo M03669_2.00	Drosophila melanogaster	DNMCCGTTA	TAACGGKNH	SELEX Nitta et al.(2015) ovo_1	0.797	0.913
ovo M06064_2.00	Drosophila melanogaster	CHGTTAHW	WDTAACDG	B1H Zhu et al.(2011) ovo_FlyReg_FBgn0003028	0.797	0.913
ovo M06065_2.00	Drosophila melanogaster	RGTHCCGTTAT	ATAACGGDACY	B1H Zhu et al.(2011) ovo_SANGER_5_FBgn0003028	0.797	0.913
ovo M06066_2.00	Drosophila melanogaster	DDTMCCGTTABNYN	NRNVTAACGGKAHH	B1H Zhu et al.(2011) ovo_SOLEXA_5_FBgn0003028	0.797	0.913
ovo M02671_2.00	Drosophila melanogaster	DCNGTTWSD	HSWAACNGH	SELEX Mathelier et al.(2014) MA0126.1	0.797	0.913
ovo M09662_2.00	Drosophila melanogaster	DCNGTTAMWNNDV	BHNNWKTAACNGH	Misc Kulakovskiy et al.(2009) ovo	0.797	0.913
ovo M10373_2.00	Drosophila melanogaster	NNNDCNGTTWSDDNN	NNHHSWAACNGHNNN	Transfac Matys et al.(2006) I$OVO_01	0.797	0.913
ovo M10374_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$OVO_Q6	0.797	0.913
lin-48 M00614_2.00	Caenorhabditis elegans	HCCGTTAB	VTAACGGD	PBM Narasimhan et al.(2015) pTH9155	0.794	0.841
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LDEC009536-PA	C2H2 ZF	548	570	FACRICNKTFALQRLLNRHMKCH
LDEC009536-PA	C2H2 ZF	576	598	YLCTFCGKGFNDTFDLKRHTRTH
LDEC009536-PA	C2H2 ZF	604	627	YKCALCEKSFTQRCSLESHCLKVH

Links
Other C2H2 ZF family TFs
Other *Leptinotarsa decemlineata* TFs

70 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action