AMEC006310 (Anopheles melas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AMEC006310 T149303_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.768 0.832
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.768 0.832
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.768 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEC006310-PA C2H2 ZF 378 400
AMEC006310-PA C2H2 ZF 410 431
AMEC006310-PA C2H2 ZF 435 457
AMEC006310-PA C2H2 ZF 463 485
AMEC006310-PA C2H2 ZF 491 512

Links

Other C2H2 ZF family TFs
Other Anopheles melas TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006244 Ricinus communis 30169.m006244 N
AC234522.1_FG009 Zea mays AC234522.1_FG009 N
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N
BGIOSGA031305 Oryza indica BGIOSGA031305 N
cassava18962.valid.m1 Manihot esculenta cassava18962.valid.m1 N
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N
gene13234-v1.0-hybrid Fragaria vesca gene13234-v1.0-hybrid N
GLYMA10G37780 Glycine max GLYMA10G37780 N
Gorai.004G117900 Gossypium raimondii Gorai.004G117900 N
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N
GRMZM2G142502 Zea mays GRMZM2G142502 N
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N
MDP0000157870 Malus domestica MDP0000157870 N
MDP0000291317 Malus domestica MDP0000291317 N
MDP0000905888 Malus domestica MDP0000905888 N
mgf002951m Mimulus guttatus mgf002951m N
OBART09G20240 Oryza barthii OBART09G20240 N
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N
OMERI01G25790 Oryza meridionalis OMERI01G25790 N
ONIVA03G00390 Oryza nivara ONIVA03G00390 N
OPUNC09G18580 Oryza punctata OPUNC09G18580 N
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N
OS09G0570200 Oryza sativa OS09G0570200 N
PK09701.1 Cannabis sativa PK09701.1 N
Pm019310 Prunus mume Pm019310 N
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N
TCM_015200 Theobroma cacao TCM_015200 N
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N