Hsal_09569--XP_001121566.1_APIME (Harpegnathos saltator)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 Hsal_09569--XP_001121566.1_APIME T160549_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.929 0.929
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.929 0.929
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.929 0.929
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.929 0.929
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.929 0.929
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.929 0.929
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_09569--XP_001121566.1_APIME CBF/NF-Y 168 223

Links

Other CBF/NF-Y family TFs
Other Harpegnathos saltator TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27956.m000359 Ricinus communis 27956.m000359 I
30125.m001257 Ricinus communis 30125.m001257 I
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I
AMTR_s00045p00146180 Amborella trichopoda AMTR_s00045p00146180 I
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I
Aquca_003_00245 Aquilegia coerulea Aquca_003_00245 I
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I
Aquca_020_00444 Aquilegia coerulea Aquca_020_00444 I
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I
AtMYB50 Arabidopsis thaliana AT1G57560 I
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I
ATY53 Arabidopsis thaliana AT3G12720 D
ATY53 Arabidopsis lyrata scaffold_301452.1 I
ATY53 Vitis vinifera VIT_19s0085g00940 I
BGIOSGA004306 Oryza indica BGIOSGA004306 I
BGIOSGA008698 Oryza indica BGIOSGA008698 I
BGIOSGA010658 Oryza indica BGIOSGA010658 I
BGIOSGA024270 Oryza indica BGIOSGA024270 I
BGIOSGA027659 Oryza indica BGIOSGA027659 I
Bo1g134790 Brassica oleracea Bo1g134790 I
Bo1g138990 Brassica oleracea Bo1g138990 I
Bo2g156300 Brassica oleracea Bo2g156300 I
Bo5g133210 Brassica oleracea Bo5g133210 I
Bo7g095130 Brassica oleracea Bo7g095130 I
Bo9g004210 Brassica oleracea Bo9g004210 I
Bo9g010860 Brassica oleracea Bo9g010860 I
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I
Bra021515 Brassica rapa Bra021515 I
Bra034738 Brassica rapa Bra034738 I
Bra036317 Brassica rapa Bra036317 I
Bra036588 Brassica rapa Bra036588 I
Bra039339 Brassica rapa Bra039339 I
BRADI1G26920 Brachypodium distachyon BRADI1G26920 I
BRADI2G47887 Brachypodium distachyon BRADI2G47887 I
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I
Carubv10001224m.g Capsella rubella Carubv10001224m.g I
Carubv10001308m.g Capsella rubella Carubv10001308m.g I
Carubv10015099m.g Capsella rubella Carubv10015099m.g I
Carubv10015767m.g Capsella rubella Carubv10015767m.g I
cassava11527.m1 Manihot esculenta cassava11527.m1 I
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I
cassava26068.m1 Manihot esculenta cassava26068.m1 I
cassava26284.m1 Manihot esculenta cassava26284.m1 I
cassava33147.m1 Manihot esculenta cassava33147.m1 I
cassava34928.m1 Manihot esculenta cassava34928.m1 I
cassava44228.m1 Manihot esculenta cassava44228.m1 I
Ca_01055 Cicer arietinum Ca_01055 I
Ca_01072 Cicer arietinum Ca_01072 I
Ca_02730 Cicer arietinum Ca_02730 I
Ca_03589 Cicer arietinum Ca_03589 I
Ca_10069 Cicer arietinum Ca_10069 I
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I
Cla001724 Citrullus lanatus Cla001724 I
Cla005219 Citrullus lanatus Cla005219 I
Cla010067 Citrullus lanatus Cla010067 N
Cla012793 Citrullus lanatus Cla012793 I
Cla020303 Citrullus lanatus Cla020303 I
Cucsa.048980 Cucumis sativus Cucsa.048980 N
Cucsa.051050 Cucumis sativus Cucsa.051050 I
Cucsa.090310 Cucumis sativus Cucsa.090310 I
Cucsa.313950 Cucumis sativus Cucsa.313950 I
Cucsa.340960 Cucumis sativus Cucsa.340960 I
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I
evm.TU.supercontig_25.69 Carica papaya evm.TU.supercontig_25.69 I
e_gw1.211.99.1 Physcomitrella patens e_gw1.211.99.1 I
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I
F775_00835 Aegilops tauschii F775_00835 I
F775_08647 Aegilops tauschii F775_08647 I
F775_17110 Aegilops tauschii F775_17110 I
F775_18488 Aegilops tauschii F775_18488 I
F775_28951 Aegilops tauschii F775_28951 I
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I
gene31836-v1.0-hybrid Fragaria vesca gene31836-v1.0-hybrid I
GLYMA03G38660 Glycine max GLYMA03G38660 I
GLYMA07G01050 Glycine max GLYMA07G01050 I
GLYMA08G17371 Glycine max GLYMA08G17371 I
GLYMA08G20440 Glycine max GLYMA08G20440 I
GLYMA13G42431 Glycine max GLYMA13G42431 I
GLYMA15G02955 Glycine max GLYMA15G02955 I
GLYMA19G41250 Glycine max GLYMA19G41250 I
GLYMA20G22230 Glycine max GLYMA20G22230 I
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I
GRMZM2G088783 Zea mays GRMZM2G088783 I
GRMZM2G147698 Zea mays GRMZM2G147698 I
GRMZM2G170049 Zea mays GRMZM2G170049 I
GRMZM2G172327 Zea mays GRMZM2G172327 I
GRMZM2G325907 Zea mays GRMZM2G325907 I
GRMZM2G496770 Zea mays GRMZM2G496770 I
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I
GSMUA_Achr1G18990_001 Musa acuminata GSMUA_Achr1G18990_001 I
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I
GSMUA_Achr3G12200_001 Musa acuminata GSMUA_Achr3G12200_001 I
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I
GSMUA_Achr6G36930_001 Musa acuminata GSMUA_Achr6G36930_001 I
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I
GSMUA_Achr9G25110_001 Musa acuminata GSMUA_Achr9G25110_001 I
GSMUA_AchrUn_randomG00040_001 Musa acuminata GSMUA_AchrUn_randomG00040_001 I
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I
LPERR01G24370 Leersia perrieri LPERR01G24370 I
LPERR07G12760 Leersia perrieri LPERR07G12760 I
LPERR08G03020 Leersia perrieri LPERR08G03020 I
Lus10005739.g Linum usitatissimum Lus10005739.g I
Lus10005740.g Linum usitatissimum Lus10005740.g I
Lus10015608.g Linum usitatissimum Lus10015608.g I
Lus10027458.g Linum usitatissimum Lus10027458.g I
Lus10039213.g Linum usitatissimum Lus10039213.g I
MDP0000148894 Malus domestica MDP0000148894 I
MDP0000152575 Malus domestica MDP0000152575 I
MDP0000157506 Malus domestica MDP0000157506 I
MDP0000226667 Malus domestica MDP0000226667 I
MDP0000601420 Malus domestica MDP0000601420 I
MDP0000653903 Malus domestica MDP0000653903 I
MDP0000896053 Malus domestica MDP0000896053 I
MDP0000932804 Malus domestica MDP0000932804 I
mgf024114m Mimulus guttatus mgf024114m I
mgf026023m Mimulus guttatus mgf026023m I
MLOC_13019 Hordeum vulgare MLOC_13019 I
MLOC_16981 Hordeum vulgare MLOC_16981 I
MLOC_18177 Hordeum vulgare MLOC_18177 I
MLOC_37780 Hordeum vulgare MLOC_37780 I
MLOC_56753 Hordeum vulgare MLOC_56753 I
MTR_1g085040 Medicago truncatula MTR_1g085040 I
MTR_2g064160 Medicago truncatula MTR_2g064160 I
MTR_2g099740 Medicago truncatula MTR_2g099740 I
MTR_7g111290 Medicago truncatula MTR_7g111290 I
MTR_8g017340 Medicago truncatula MTR_8g017340 I
MTR_8g017350 Medicago truncatula MTR_8g017350 I
MTR_8g017390 Medicago truncatula MTR_8g017390 I
MTR_8g017440 Medicago truncatula MTR_8g017440 I
MTR_8g017500 Medicago truncatula MTR_8g017500 I
MTR_8g017540 Medicago truncatula MTR_8g017540 I
MYB26 Arabidopsis thaliana AT3G13890 I
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I
MYB26 Populus trichocarpa POPTR_0001s20370 I
MYB26 Vitis vinifera VIT_09s0002g01670 I
MYB55 Arabidopsis thaliana AT4G01680 D
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I
MYB86 Arabidopsis thaliana AT5G26660 I
OB01G37410 Oryza brachyantha OB01G37410 I
OB02G32950 Oryza brachyantha OB02G32950 I
OB08G13090 Oryza brachyantha OB08G13090 I
OBART02G25570 Oryza barthii OBART02G25570 I
OBART07G15150 Oryza barthii OBART07G15150 I
OBART08G03020 Oryza barthii OBART08G03020 I
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I
OLONG_008660 Oryza longistaminata OLONG_008660 I
OMERI02G25080 Oryza meridionalis OMERI02G25080 I
OMERI03G17220 Oryza meridionalis OMERI03G17220 I
OMERI07G11910 Oryza meridionalis OMERI07G11910 I
OMERI08G02950 Oryza meridionalis OMERI08G02950 I
ONIVA02G28010 Oryza nivara ONIVA02G28010 I
ONIVA06G02400 Oryza nivara ONIVA06G02400 I
OPUNC01G28160 Oryza punctata OPUNC01G28160 I
OPUNC02G23410 Oryza punctata OPUNC02G23410 I
OPUNC07G13970 Oryza punctata OPUNC07G13970 I
OPUNC08G02760 Oryza punctata OPUNC08G02760 I
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I
ORGLA01G0234600 Oryza glaberrima ORGLA01G0234600 I
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I
OS01G0709000 Oryza sativa OS01G0709000 I
OS07G0497500 Oryza sativa OS07G0497500 I
OS08G0151300 Oryza sativa OS08G0151300 I
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I
Pavir.Ea02594 Panicum virgatum Pavir.Ea02594 I
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I
Pavir.J03230 Panicum virgatum Pavir.J03230 I
Pavir.J21520 Panicum virgatum Pavir.J21520 I
Pavir.J29561 Panicum virgatum Pavir.J29561 I
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I
PGSC0003DMG400037038 Solanum tuberosum PGSC0003DMG400037038 I
PK03176.1 Cannabis sativa PK03176.1 I
PK18276.1 Cannabis sativa PK18276.1 I
PK22855.1 Cannabis sativa PK22855.1 I
Pm003267 Prunus mume Pm003267 I
Pm010847 Prunus mume Pm010847 I
Pm010927 Prunus mume Pm010927 I
Pm013322 Prunus mume Pm013322 I
Pm019344 Prunus mume Pm019344 I
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I
PRUPE_ppa019718mg Prunus persica PRUPE_ppa019718mg I
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I
SapurV1A.0538s0150 Salix purpurea SapurV1A.0538s0150 I
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I
SapurV1A.1869s0040 Salix purpurea SapurV1A.1869s0040 I
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I
Sb01g034270 Sorghum bicolor Sb01g034270 I
Sb02g033830 Sorghum bicolor Sb02g033830 I
Sb03g032600 Sorghum bicolor Sb03g032600 I
Sb04g033680 Sorghum bicolor Sb04g033680 I
Sb06g023610 Sorghum bicolor Sb06g023610 I
Sb07g003320 Sorghum bicolor Sb07g003320 I
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I
Si002319m.g Setaria italica Si002319m.g I
Si030152m.g Setaria italica Si030152m.g I
Si036638m.g Setaria italica Si036638m.g I
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I
Solyc03g121740.1 Solanum lycopersicum Solyc03g121740.1 I
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I
TCM_005977 Theobroma cacao TCM_005977 I
TCM_026853 Theobroma cacao TCM_026853 I
TCM_029065 Theobroma cacao TCM_029065 I
TCM_033645 Theobroma cacao TCM_033645 I
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I
Traes_3AL_E3BF20F0D Triticum aestivum Traes_3AL_E3BF20F0D I
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I
Traes_7AL_0BCF482E8 Triticum aestivum Traes_7AL_0BCF482E8 I
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I
Traes_7DL_AD4395F8F Triticum aestivum Traes_7DL_AD4395F8F I
TRIUR3_20789 Triticum urartu TRIUR3_20789 I
TRIUR3_24104 Triticum urartu TRIUR3_24104 I
TRIUR3_25230 Triticum urartu TRIUR3_25230 I
TRIUR3_26358 Triticum urartu TRIUR3_26358 I
TRIUR3_32691 Triticum urartu TRIUR3_32691 I
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I