Thhalv10020047m.g (Eutrema salsugineum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Thhalv10020047m.g T163600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.851 0.851
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020047m CG-1 31 145
Thhalv10020070m CG-1 4 118

Links

Other CG-1 family TFs
Other Eutrema salsugineum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00107p00095070 Amborella trichopoda AMTR_s00107p00095070 I 0.000
BGIOSGA017525 Oryza indica BGIOSGA017525 N 0.000
Bostr.0568s0279 Boechera stricta Bostr.0568s0279 I 0.000
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N 0.000
Cagra.0917s0073 Capsella grandiflora Cagra.0917s0073 I 0.000
Carubv10026925m.g Capsella rubella Carubv10026925m.g I 0.000
cassava42814.valid.m1 Manihot esculenta cassava42814.valid.m1 I 0.000
Eucgr.D01731 Eucalyptus grandis Eucgr.D01731 I 0.000
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I 0.000
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I 0.000
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I 0.000
GRMZM2G100982 Zea mays GRMZM2G100982 I 0.000
GRMZM5G846057 Zea mays GRMZM5G846057 I 0.000
LPERR05G22130 Leersia perrieri LPERR05G22130 N 0.000
mgf016403m Mimulus guttatus mgf016403m I 0.000
MLOC_53577 Hordeum vulgare MLOC_53577 N 0.000
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N 0.000
ONIVA05G28560 Oryza nivara ONIVA05G28560 N 0.000
OPUNC05G24070 Oryza punctata OPUNC05G24070 N 0.000
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N 0.000
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N 0.000
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N 0.000
OS05G0572000 Oryza sativa OS05G0572000 N 0.000
Pavir.J01332 Panicum virgatum Pavir.J01332 N 0.000
Pavir.J10163 Panicum virgatum Pavir.J10163 N 0.000
Sb09g029070 Sorghum bicolor Sb09g029070 N 0.000
TCM_016452 Theobroma cacao TCM_016452 I 0.000