CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOGAG00000031268
(
Otolemur garnettii
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
ENSOGAG00000031268
T164709_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR
YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.703
0.703
YBX1
M10411_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.703
0.703
YBX1
M10412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.703
0.703
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD
HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000017654
CSD
47
114
DRTVKWFNVKKTSFVNSNHTEGDVFIHQTAINKNNPRKYLHSVRDRETVEFDVAEGERGTEAANVTGP
Links
Other
CSD
family TFs
Other
Otolemur garnettii
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R006672
Aptenodytes forsteri
Afo_R006672
I
0.750
Alligator_sinensis_CCG014301.1
Alligator sinensis
Alligator_sinensis_CCG014301.1
I
0.769
Brh_R010004
Buceros rhinoceros
Brh_R010004
I
0.750
CLEC013418
Cimex lectularius
CLEC013418
I
0.702
Cmyd_10000339
Chelonia mydas
Cmyd_10000339
I
0.757
Cmyd_10002115
Chelonia mydas
Cmyd_10002115
I
0.806
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
0.811
ENSCJAG00000010572
Callithrix jacchus
ENSCJAG00000010572
I
0.708
ENSCSAG00000001168
Chlorocebus sabaeus
ENSCSAG00000001168
I
0.735
ENSFCAG00000022604
Felis catus
ENSFCAG00000022604
I
0.750
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.735
ENSGGOG00000023840
Gorilla gorilla
ENSGGOG00000023840
I
0.714
ENSMEUG00000009893
Macropus eugenii
ENSMEUG00000009893
I
0.730
ENSMLUG00000024638
Myotis lucifugus
ENSMLUG00000024638
I
0.732
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.775
ENSMPUG00000010386
Mustela putorius furo
ENSMPUG00000010386
I
0.729
ENSOCUG00000000147
Oryctolagus cuniculus
ENSOCUG00000000147
I
0.735
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
I
0.756
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
I
0.711
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.775
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
I
0.750
ENSOCUG00000028047
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.750
ENSP00000389639-D2
Bos grunniens
ENSP00000389639-D2
I
0.735
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
0.786
ENSSTOG00000000116
Ictidomys tridecemlineatus
ENSSTOG00000000116
I
0.750
ENSSTOG00000002108
Ictidomys tridecemlineatus
ENSSTOG00000002108
I
0.755
Gfo_R009480
Geospiza fortis
Gfo_R009480
I
0.750
HHAL001434-PA
Halyomorpha halys
HHAL001434-PA
I
0.703
Myotis_brandtii_YBX1_10016780
Myotis brandtii
Myotis_brandtii_YBX1_10016780
I
0.771
Myotis_brandtii_YBX2_10021025
Myotis brandtii
Myotis_brandtii_YBX2_10021025
I
0.729
Ogr02658
Ophisaurus gracilis
Ogr02658
I
0.735
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
0.703
Tal_R003478
Tyto alba
Tal_R003478
I
0.784
Tal_R011198
Tyto alba
Tal_R011198
I
0.750
YBX1
Tursiops truncatus
ENSTTRG00000001353
I
0.746
YBX1
Homo sapiens
ENSG00000065978
D
0.735
YBX1
Loxodonta africana
ENSLAFG00000031170
I
0.769
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.706
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.745
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.745
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
0.740
YBX3
Myotis lucifugus
ENSMLUG00000007476
I
0.755
YBX3
Pan troglodytes
ENSPTRG00000004681
I
0.740
YBX3
Tursiops truncatus
ENSTTRG00000008045
I
0.766