CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ppa-lag-1
(
Pristionchus pacificus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
PPA16712
T166247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA16712
CSL
17
173
SEKFFCPPPCVYLGGDGWKHKRMQVDSYRTHRLPRRLYKDARLAMLKSGSAMESTPDTEKIHEAQAGELCAFIGIGAPSDQERQSLDFSNHKVIALPSQDYCAAKSLYISDSDKRKYFELSVQFFYACAIDVGLFSSARIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Pristionchus pacificus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.000
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.000
ALUE_0000980501
Ascaris lumbricoides
ALUE_0000980501
I
0.000
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.000
ASU_07400
Ascaris suum
ASU_07400
I
0.000
Bm3734
Brugia malayi
Bm3734
I
0.000
BXY_0327500
Bursaphelenchus xylophilus
BXY_0327500
I
0.000
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.000
CRE14738
Caenorhabditis remanei
CRE14738
I
0.000
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.000
GPLIN_000471400
Globodera pallida
GPLIN_000471400
N
0.000
HPBE_0000822201
Heligmosomoides bakeri
HPBE_0000822201
I
0.000
L596_g18571
Steinernema carpocapsae
L596_g18571
I
0.000
L892_g8133
Steinernema scapterisci
L892_g8133
I
0.000
L893_g9511
Steinernema glaseri
L893_g9511
I
0.000
L898_g1167
Steinernema monticolum
L898_g1167
I
0.000
LOAG_12992
Loa loa
LOAG_12992
I
0.000
Minc08762
Meloidogyne incognita
Minc08762
N
0.000
Minc11758
Meloidogyne incognita
Minc11758
N
0.000
nDi.2.2.2.g08322
Dirofilaria immitis
nDi.2.2.2.g08322
I
0.000
nOo.2.0.1.g08993
Onchocerca ochengi
nOo.2.0.1.g08993
I
0.000
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.000
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.000
scaffold532-EXSNAP2012.4
Pristionchus exspectatus
scaffold532-EXSNAP2012.4
I
0.000
SMUV_0000837101
Syphacia muris
SMUV_0000837101
I
0.000
SPAL_0001051900
Strongyloides papillosus
SPAL_0001051900
I
0.000
SSTP_0000225800
Strongyloides stercoralis
SSTP_0000225800
I
0.000
SVE_1772700
Strongyloides venezuelensis
SVE_1772700
I
0.000
TCLT_0001044101
Thelazia callipaeda
TCLT_0001044101
I
0.000
WBGene00238790
Onchocerca volvulus
WBGene00238790
I
0.000