Ocbimv22038949m.g (Octopus bimaculoides)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Ocbimv22038949m.g T174845_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.824 0.824
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.824 0.824
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.809 0.809
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.809 0.809
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.809 0.809
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.809 0.809
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.794 0.794
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.779 0.779
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22038948m.p EBF1 24 91
Ocbimv22038949m.p EBF1 24 91
Ocbimv22038950m.p EBF1 24 91
Ocbimv22038951m.p EBF1 24 91

Links

Other EBF1 family TFs
Other Octopus bimaculoides TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB010330 Anopheles albimanus AALB010330 I 0.743
Aan_R013029 Calypte anna Aan_R013029 I 0.809
AATE014419 Anopheles atroparvus AATE014419 I 0.726
ACEP22947 Atta cephalotes ACEP22947 I 0.800
ACHR004409 Anopheles christyi ACHR004409 I 0.765
ACOM041529 Anopheles coluzzii ACOM041529 I 0.776
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.857
AEPI003553 Anopheles epiroticus AEPI003553 I 0.732
AFAF000230 Anopheles farauti AFAF000230 I 0.779
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.779
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.836
AFUN004906 Anopheles funestus AFUN004906 I 0.794
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.825
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.800
AMEC016105 Anopheles melas AMEC016105 I 0.703
AMEM017983 Anopheles merus AMEM017983 I 0.703
ASIS004664 Anopheles sinensis ASIS004664 I 0.765
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.816
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.821
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.795
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.836
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.757
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.800
csin100403 Clonorchis sinensis csin100403 N 0.735
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.779
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I 0.824
EBF1 Equus caballus ENSECAG00000007964 I 0.825
EBF1 Homo sapiens ENSG00000164330 D 0.809
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.824
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.747
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.794
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.747
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.812
EBF1 Sus scrofa ENSSSCG00000017046 I 0.812
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.809
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.809
ebf1b Danio rerio ENSDARG00000069196 I 0.809
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.779
EBF2 Gallus gallus ENSGALG00000000242 I 0.779
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.779
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.779
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.779
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.779
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.779
ebf2.S Xenopus laevis XB-GENE-971141 I 0.779
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.809
EBF3 Bos taurus ENSBTAG00000008272 I 0.809
EBF3 Canis familiaris ENSCAFG00000013267 I 0.809
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.825
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.809
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.809
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.721
EBF4 Macaca mulatta ENSMMUG00000021331 I 1.000
Ebf4 Mus musculus ENSMUSG00000053552 D 0.824
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.824
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.824
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.794
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.700
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.821
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.812
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.887
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.794
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.779
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.767
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.779
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.779
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.824
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.824
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.779
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.779
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.809
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.963
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.809
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.779
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.809
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.812
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.747
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.809
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.809
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.824
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.800
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.824
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.809
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.824
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.825
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.809
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.857
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.859
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.809
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.824
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.779
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.812
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.809
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.873
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.779
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 1.000
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.794
GF11778 Drosophila ananassae FBgn0088818 I 0.794
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.836
GH12956 Drosophila grimshawi FBgn0120434 I 0.800
GJ21945 Drosophila virilis FBgn0209060 I 0.794
GK23295 Drosophila willistoni FBgn0225257 I 0.794
GL10656 Drosophila persimilis FBgn0148266 I 0.794
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
HelroG112029 Helobdella robusta HelroG112029 I 0.706
HMEL014948 Heliconius melpomene HMEL014948 I 0.821
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.800
KGM_09934 Danaus plexippus KGM_09934 I 0.794
L889_g1820 Steinernema feltiae L889_g1820 I 0.721
L898_g8304 Steinernema monticolum L898_g8304 I 0.721
LCUP013862 Lucilia cuprina LCUP013862 I 0.779
LOAG_18199 Loa loa LOAG_18199 I 0.750
LotgiG225788 Lottia gigantea LotgiG225788 I 0.882
MCINX016126 Melitaea cinxia MCINX016126 I 0.800
MDOA011385 Musca domestica MDOA011385 I 0.794
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.825
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.757
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.750
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.750
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I 0.750
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.735
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.731
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.809
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.825
Pvit_12666 Pogona vitticeps Pvit_12666 I 1.000
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.823
Sjc_0015600 Schistosoma japonicum Sjc_0015600 I 0.735
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.809
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.765
SROB_0000545801 Schistosoma rodhaini SROB_0000545801 I 0.721
T265_13606 Opisthorchis viverrini T265_13606 N 0.735
Tal_R004164 Tyto alba Tal_R004164 I 0.836
TTAC_0000009401 Hydatigera taeniaeformis TTAC_0000009401 I 0.735
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.797