CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FRS7
(
Arabidopsis thaliana
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
AT3G06250
T178984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G06250.1
FAR1
42
117
DYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLG
AT3G06250.1
FAR1
204
280
QFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEP
AT3G06250.2
FAR1
42
117
DYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLG
AT3G06250.2
FAR1
204
280
QFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEP
AT3G06250.3
FAR1
42
117
DYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLG
AT3G06250.3
FAR1
204
280
QFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDLEP
Links
Other
FAR1
family TFs
Other
Arabidopsis thaliana
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g013440
Brassica oleracea
Bo3g013440
N
0.948
Bostr.2570s0035
Boechera stricta
Bostr.2570s0035
N
0.980
Bostr.26527s0315
Boechera stricta
Bostr.26527s0315
N
0.961
Cagra.0263s0023
Capsella grandiflora
Cagra.0263s0023
N
0.961
Cagra.3793s0006
Capsella grandiflora
Cagra.3793s0006
N
0.980
Carubv10000255m.g
Capsella rubella
Carubv10000255m.g
N
0.961
Carubv10013017m.g
Capsella rubella
Carubv10013017m.g
N
0.980
cassava1998.valid.m1
Manihot esculenta
cassava1998.valid.m1
N
0.810
Ciclev10004376m.g
Citrus clementina
Ciclev10004376m.g
N
0.797
Cucsa.253860
Cucumis sativus
Cucsa.253860
N
0.760
evm.TU.supercontig_16.55
Carica papaya
evm.TU.supercontig_16.55
N
0.856
FRS12
Arabidopsis thaliana
AT5G18960
N
0.954
gene06133-v1.0-hybrid
Fragaria vesca
gene06133-v1.0-hybrid
N
0.752
GLYMA13G28230
Glycine max
GLYMA13G28230
N
0.771
GLYMA15G10830
Glycine max
GLYMA15G10830
N
0.745
Gorai.006G255400
Gossypium raimondii
Gorai.006G255400
N
0.837
MDP0000254218
Malus domestica
MDP0000254218
N
0.778
MDP0000295749
Malus domestica
MDP0000295749
N
0.791
mgf010461m
Mimulus guttatus
mgf010461m
N
0.739
mgf011099m
Mimulus guttatus
mgf011099m
N
0.706
orange1.1g004138m.g
Citrus sinensis
orange1.1g004138m.g
N
0.797
PK22885.1
Cannabis sativa
PK22885.1
N
0.797
Pm008044
Prunus mume
Pm008044
N
0.791
POPTR_0008s20380
Populus trichocarpa
POPTR_0008s20380
N
0.784
POPTR_0010s03000
Populus trichocarpa
POPTR_0010s03000
N
0.805
PRUPE_ppa001884mg
Prunus persica
PRUPE_ppa001884mg
N
0.791
SapurV1A.0152s0560
Salix purpurea
SapurV1A.0152s0560
N
0.771
SapurV1A.0407s0270
Salix purpurea
SapurV1A.0407s0270
N
0.786
SapurV1A.1026s0020
Salix purpurea
SapurV1A.1026s0020
N
0.771
Solyc10g084220.1
Solanum lycopersicum
Solyc10g084220.1
N
0.708
TCM_021065
Theobroma cacao
TCM_021065
N
0.850
Thhalv10012731m.g
Eutrema salsugineum
Thhalv10012731m.g
N
0.948
Thhalv10020128m.g
Eutrema salsugineum
Thhalv10020128m.g
N
0.980