CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.N002500
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.N002500
T181519_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.N002500.1
FAR1
78
169
EFYIAYGRHIGFTVRIHHNRRSRINNSVIGQDFVCSKEGFREKKYMYRKDRVLPPPPITREGCPAMLRLALRDGVKWVVTKFVKEHNHSLMS
Gorai.N002500.2
FAR1
78
169
EFYIAYGRHIGFTVRIHHNRRSRINNSVIGQDFVCSKEGFREKKYMYRKDRVLPPPPITREGCPAMLRLALRDGVKWVVTKFVKEHNHSLMS
Gorai.N002500.3
FAR1
78
169
EFYIAYGRHIGFTVRIHHNRRSRINNSVIGQDFVCSKEGFREKKYMYRKDRVLPPPPITREGCPAMLRLALRDGVKWVVTKFVKEHNHSLMS
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035743
Oryza indica
BGIOSGA035743
N
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
BRADI4G09180
Brachypodium distachyon
BRADI4G09180
N
BRADI4G09190
Brachypodium distachyon
BRADI4G09190
N
F775_08284
Aegilops tauschii
F775_08284
N
F775_08285
Aegilops tauschii
F775_08285
N
GRMZM2G073823
Zea mays
GRMZM2G073823
N
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
MLOC_7746
Hordeum vulgare
MLOC_7746
N
OB11G28100
Oryza brachyantha
OB11G28100
N
OBART11G23680
Oryza barthii
OBART11G23680
N
OGLUM11G22840
Oryza glumaepatula
OGLUM11G22840
N
ONIVA11G23200
Oryza nivara
ONIVA11G23200
N
ORGLA11G0190400
Oryza glaberrima
ORGLA11G0190400
N
ORUFI11G25560
Oryza rufipogon
ORUFI11G25560
N
OS11G0705900
Oryza sativa
OS11G0705900
N
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
Pavir.J31658
Panicum virgatum
Pavir.J31658
N
Pavir.J39141
Panicum virgatum
Pavir.J39141
N
Sb05g027785
Sorghum bicolor
Sb05g027785
N
Si026116m.g
Setaria italica
Si026116m.g
N
Traes_4AL_977AF4963
Triticum aestivum
Traes_4AL_977AF4963
N
Traes_4AL_B2CACD56E
Triticum aestivum
Traes_4AL_B2CACD56E
N
Traes_4AL_E769BB5A6
Triticum aestivum
Traes_4AL_E769BB5A6
N
Traes_4BS_2EA81743E1
Triticum aestivum
Traes_4BS_2EA81743E1
N
Traes_4BS_344A932261
Triticum aestivum
Traes_4BS_344A932261
N
Traes_4DS_A5CD70F30
Triticum aestivum
Traes_4DS_A5CD70F30
N
Traes_4DS_C7C37A73D
Triticum aestivum
Traes_4DS_C7C37A73D
N