csin100553 (Clonorchis sinensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 csin100553 T190380_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXF1
M10529_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL5_Q3 		0.831 0.814
FOXF1
M10530_2.00 		Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR		 Transfac
Matys et al.(2006)
V$HFH8_01 		0.831 0.814
FOXF2
M02680_2.00 		Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV		 SELEX
Mathelier et al.(2014)
MA0030.1 		0.796 0.802
FOXF2
M10548_2.00 		Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV		 Transfac
Matys et al.(2006)
V$FREAC2_01 		0.796 0.802
bin
M03752_2.00 		Drosophila melanogaster
HTAATGTAAACAAW
WTTGTTTACATTAD		 SELEX
Nitta et al.(2015)
bin_1 		0.776 0.651
bin
M06199_2.00 		Drosophila melanogaster
TAAACARVGA
TCBYTGTTTA		 B1H
Zhu et al.(2011)
bin_FlyReg_FBgn0045759 		0.776 0.651
bin
M06200_2.00 		Drosophila melanogaster
RTAAACA
TGTTTAY		 B1H
Zhu et al.(2011)
bin_SANGER_5_FBgn0045759 		0.776 0.651
FOXE1
M04845_2.00 		Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX 		0.749 0.558
FOXE1
M04846_2.00 		Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV		 SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX 		0.749 0.558
FOXD2
M03042_2.00 		Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN		 SELEX
Jolma et al.(2013)
FOXD2_1 		0.743 0.558
FOXD2
M03043_2.00 		Homo sapiens
RTAAAYA
TRTTTAY		 SELEX
Jolma et al.(2013)
FOXD2_2 		0.743 0.558
FOXD2
M04851_2.00 		Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD		 SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1 		0.743 0.558
FOXD2
M04852_2.00 		Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB		 SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2 		0.743 0.558
FOXD1
M02681_2.00 		Homo sapiens
GTAAACAD
HTGTTTAC		 SELEX
Mathelier et al.(2014)
MA0031.1 		0.743 0.558
Foxd1
M10570_2.00 		Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS		 Transfac
Matys et al.(2006)
V$FREAC4_01 		0.743 0.558
FOXD1
M10567_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FREAC4_02 		0.743 0.558
FOXD2
M04853_2.00 		Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD		 SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1 		0.743 0.558
FOXD2
M04854_2.00 		Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY		 SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2 		0.743 0.558
Gm5294
M01984_2.00 		Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN		 PBM
Weirauch et al.(2014)
pTH3802 		0.739 0.500
FOXD4L4
M10564_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXD4L4_01 		0.739 0.535
FOXD3
M03044_2.00 		Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN		 SELEX
Jolma et al.(2013)
FOXD3_1 		0.736 0.547
FOXD3
M03045_2.00 		Homo sapiens
RTAAAYA
TRTTTAY		 SELEX
Jolma et al.(2013)
FOXD3_2 		0.736 0.547
FOXD3
M04855_2.00 		Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB		 SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX 		0.736 0.547
Foxd3
M09114_2.00 		Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH		 Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C 		0.736 0.547
FOXD3
M10565_2.00 		Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY		 Transfac
Matys et al.(2006)
V$FOXD3_01 		0.736 0.547
FOXD3
M10566_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH2_Q5 		0.736 0.547
FOXD3
M04856_2.00 		Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB		 SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX 		0.736 0.547
foxe3
M01228_2.00 		Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW		 PBM
Lambert et al.(2019)
pTH9824 		0.734 0.570
let-381
M00664_2.00 		Caenorhabditis elegans
RTAAACAW
WTGTTTAY		 PBM
Narasimhan et al.(2015)
pTH9057 		0.729 0.651
fd64A
M06197_2.00 		Drosophila melanogaster
KVWAAACA
TGTTTWBM		 B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895 		0.729 0.535
Foxl1
M00164_2.00 		Mus musculus
NNNRTMAAYA
TRTTKAYNNN		 PBM
Badis et al.(2009)
Foxl1_2809 		0.729 0.593
FOXL1
M03034_2.00 		Homo sapiens
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
FOXL1_1 		0.729 0.581
FOXL1
M03035_2.00 		Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN		 SELEX
Jolma et al.(2013)
FOXL1_2 		0.729 0.581
FOXL1
M10558_2.00 		Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH		 Transfac
Matys et al.(2006)
V$FREAC7_01 		0.729 0.581
fd59A
M03739_2.00 		Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD		 SELEX
Nitta et al.(2015)
fd59A_1 		0.719 0.547
fd59A
M03740_2.00 		Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW		 SELEX
Nitta et al.(2015)
fd59A_2 		0.719 0.547
fd59A
M03741_2.00 		Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR		 SELEX
Nitta et al.(2015)
fd59A_3 		0.719 0.547
fd59A
M03742_2.00 		Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK		 SELEX
Nitta et al.(2015)
fd59A_4 		0.719 0.547
FOXL2
M04847_2.00 		Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN		 SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX 		0.686 0.605
Foxl2
M09112_2.00 		Mus musculus
DWDWRTAAACA
TGTTTAYWHWH		 Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C 		0.686 0.605
FOXL2
M10560_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXL2_Q2 		0.686 0.605
FOXL2
M10561_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXL2_Q5 		0.686 0.605
FOXL2
M04848_2.00 		Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD		 SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX 		0.686 0.605
FOXC1
M00257_2.00 		Homo sapiens
NNNVHHAAYA
TRTTDDBNNN		 PBM
Barrera et al.(2016)
FOXC1_REF 		0.684 0.570
Foxc2
M00796_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2013)
pTH3796 		0.684 0.570
Foxc1
M01982_2.00 		Mus musculus
HNNRHMAAYA
TRTTKDYNND		 PBM
Weirauch et al.(2014)
pTH2673 		0.684 0.570
FOXC1
M03013_2.00 		Homo sapiens
AWRTAAAYAAAYA
TRTTTRTTTAYWT		 SELEX
Jolma et al.(2013)
FOXC1_1 		0.684 0.570
FOXC1
M03014_2.00 		Homo sapiens
NRWMAATATTKWYN
NRWMAATATTKWYN		 SELEX
Jolma et al.(2013)
FOXC1_2 		0.684 0.570
FOXC1
M03015_2.00 		Homo sapiens
WRWRTMAAYAW
WTRTTKAYWYW		 SELEX
Jolma et al.(2013)
FOXC1_3 		0.684 0.570
FOXC2
M03036_2.00 		Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN		 SELEX
Jolma et al.(2013)
FOXC2_1 		0.684 0.570
FOXC2
M03037_2.00 		Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
FOXC2_2 		0.684 0.570
FOXC2
M03038_2.00 		Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW		 SELEX
Jolma et al.(2013)
FOXC2_3 		0.684 0.570
Foxc1
M03059_2.00 		Mus musculus
RTAAAYAAACA
TGTTTRTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_1 		0.684 0.570
Foxc1
M03060_2.00 		Mus musculus
RTAAACA
TGTTTAY		 SELEX
Jolma et al.(2013)
Foxc1_2 		0.684 0.570
FOXC2
M04841_2.00 		Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1 		0.684 0.570
FOXC2
M04842_2.00 		Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY		 SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2 		0.684 0.570
FOXC1
M09083_2.00 		Homo sapiens
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C 		0.684 0.570
Foxc1
M09111_2.00 		Mus musculus
SBWAWRTAAACADHN
NDHTGTTTAYWTWVS		 Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C 		0.684 0.570
FOXC2
M10559_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKHL14_Q2 		0.684 0.570
FOXC1
M10525_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXC1_Q4 		0.684 0.570
FOXC1
M10526_2.00 		Homo sapiens
TSTTTATTTACDBNVN
NBNVHGTAAATAAASA		 Transfac
Matys et al.(2006)
V$FREAC3_01 		0.684 0.570
FOXC2
M04843_2.00 		Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1 		0.684 0.570
FOXC2
M04844_2.00 		Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB		 SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2 		0.684 0.570
FOXC1
M00253_2.00 		Homo sapiens
NNHATAAWHAN
NTDWTTATDNN		 PBM
Barrera et al.(2016)
FOXC1_F112S 		0.684 0.558
FOXC1
M00255_2.00 		Homo sapiens
NRTATATWHNNN
NNNDWATATAYN		 PBM
Barrera et al.(2016)
FOXC1_L130F 		0.684 0.558
FOXC1
M00256_2.00 		Homo sapiens
NNNNWWTYAMAWN
NWTKTRAWWNNNN		 PBM
Barrera et al.(2016)
FOXC1_P79L 		0.684 0.558
FOXC1
M00258_2.00 		Homo sapiens
NNNAMAAYANN
NNTRTTKTNNN		 PBM
Barrera et al.(2016)
FOXC1_S131L 		0.684 0.558
FOXC1
M00259_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 PBM
Barrera et al.(2016)
FOXC1_S82T 		0.684 0.558
FOXC1
M00254_2.00 		Homo sapiens
RRTAAACANN
NNTGTTTAYY		 PBM
Barrera et al.(2016)
FOXC1_I126M 		0.667 0.570
FOXI1
M03026_2.00 		Homo sapiens
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
FOXI1_1 		0.665 0.570
FOXI1
M03027_2.00 		Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY		 SELEX
Jolma et al.(2013)
FOXI1_2 		0.665 0.570
FOXI1
M04827_2.00 		Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX 		0.665 0.570
FOXI1
M04829_2.00 		Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX 		0.665 0.570
FOXI1
M09095_2.00 		Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B 		0.665 0.570
FOXI1
M10556_2.00 		Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD		 Transfac
Matys et al.(2006)
V$HFH3_01 		0.665 0.570
FOXI1
M04828_2.00 		Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX 		0.665 0.570
FOXI1
M04830_2.00 		Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX 		0.665 0.570
Foxi1
M09109_2.00 		Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B 		0.665 0.558
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin100553 Forkhead 511 600

Links

Other Forkhead family TFs
Other Clonorchis sinensis TFs

1107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015091 Calypte anna Aan_R015091 I
Afo_R014961 Aptenodytes forsteri Afo_R014961 I
Alligator_sinensis_CCG010361.1 Alligator sinensis Alligator_sinensis_CCG010361.1 I
Aqu1.217685 Amphimedon queenslandica Aqu1.217685 N
Aqu1.219264 Amphimedon queenslandica Aqu1.219264 I
CapteG131091 Capitella teleta CapteG131091 I
CGI_10024271 Crassostrea gigas CGI_10024271 N
Cmyd_10017062 Chelonia mydas Cmyd_10017062 I
ENSACAG00000003119 Anolis carolinensis ENSACAG00000003119 I
ENSAMEG00000007114 Ailuropoda melanoleuca ENSAMEG00000007114 I
ENSAMXG00000000331 Astyanax mexicanus ENSAMXG00000000331 I
ENSAMXG00000019220 Astyanax mexicanus ENSAMXG00000019220 N
ENSAPLG00000006681 Anas platyrhynchos ENSAPLG00000006681 I
ENSBTAP00000021593-D1 Bos grunniens ENSBTAP00000021593-D1 I
ENSCPOG00000005302 Cavia porcellus ENSCPOG00000005302 I
ENSCSAG00000006853 Chlorocebus sabaeus ENSCSAG00000006853 I
ENSCSAG00000008358 Chlorocebus sabaeus ENSCSAG00000008358 I
ENSGACG00000010739 Gasterosteus aculeatus ENSGACG00000010739 I
ENSGALG00000026590 Gallus gallus ENSGALG00000026590 I
ENSGMOG00000002059 Gadus morhua ENSGMOG00000002059 I
ENSGMOG00000017987 Gadus morhua ENSGMOG00000017987 I
ENSLACG00000004995 Latimeria chalumnae ENSLACG00000004995 I
ENSLACG00000018298 Latimeria chalumnae ENSLACG00000018298 I
ENSLOCG00000006468 Lepisosteus oculatus ENSLOCG00000006468 I
ENSLOCG00000014806 Lepisosteus oculatus ENSLOCG00000014806 I
ENSMMUG00000000225 Macaca mulatta ENSMMUG00000000225 I
ENSMPUG00000009506 Mustela putorius furo ENSMPUG00000009506 I
ENSNLEG00000000826 Nomascus leucogenys ENSNLEG00000000826 I
ENSNLEG00000007555 Nomascus leucogenys ENSNLEG00000007555 I
ENSOANG00000010450 Ornithorhynchus anatinus ENSOANG00000010450 I
ENSOARG00000012896 Ovis aries ENSOARG00000012896 I
ENSOARG00000016409 Ovis aries ENSOARG00000016409 I
ENSOGAG00000026529 Otolemur garnettii ENSOGAG00000026529 I
ENSONIG00000010668 Oreochromis niloticus ENSONIG00000010668 N
ENSONIG00000015310 Oreochromis niloticus ENSONIG00000015310 I
ENSP00000366330 Macaca fascicularis ENSP00000366330 I
ENSPANG00000025104 Papio anubis ENSPANG00000025104 I
ENSPFOG00000004556 Poecilia formosa ENSPFOG00000004556 I
ENSPFOG00000016517 Poecilia formosa ENSPFOG00000016517 N
ENSPPYG00000019284 Pongo abelii ENSPPYG00000019284 I
ENSPSIG00000009426 Pelodiscus sinensis ENSPSIG00000009426 I
ENSPSIG00000014849 Pelodiscus sinensis ENSPSIG00000014849 I
ENSSHAG00000011337 Sarcophilus harrisii ENSSHAG00000011337 I
ENSSTOG00000000238 Ictidomys tridecemlineatus ENSSTOG00000000238 I
ENSSTOG00000022758 Ictidomys tridecemlineatus ENSSTOG00000022758 I
ENSTSYG00000008257 Tarsius syrichta ENSTSYG00000008257 I
ENSXMAG00000003301 Xiphophorus maculatus ENSXMAG00000003301 I
ENSXMAG00000004532 Xiphophorus maculatus ENSXMAG00000004532 N
Gfo_R008822 Geospiza fortis Gfo_R008822 I
klf13 Xenopus tropicalis XB-GENE-479837 I
klf13 Tetraodon nigroviridis ENSTNIG00000008397 I
klf13 Takifugu rubripes ENSTRUG00000011759 I
KLF13 Taeniopygia guttata ENSTGUG00000005470 I
KLF13 Pan troglodytes ENSPTRG00000006860 I
KLF13 Sus scrofa ENSSSCG00000026006 I
KLF13 Oryctolagus cuniculus ENSOCUG00000011101 I
KLF13 Callithrix jacchus ENSCJAG00000017617 I
klf13 Danio rerio ENSDARG00000061368 I
Klf13 Mus musculus ENSMUSG00000052040 I
KLF13 Homo sapiens ENSG00000169926 D
KLF13 Procavia capensis ENSPCAG00000009647 I
KLF13 Meleagris gallopavo ENSMGAG00000004699 I
KLF9 Tursiops truncatus ENSTTRG00000001149 I
KLF9 Bos taurus ENSBTAG00000016229 I
KLF9 Callithrix jacchus ENSCJAG00000001575 I
KLF9 Dasypus novemcinctus ENSDNOG00000018839 I
KLF9 Equus caballus ENSECAG00000024925 I
KLF9 Homo sapiens ENSG00000119138 D
KLF9 Gallus gallus ENSGALG00000027374 I
KLF9 Gorilla gorilla ENSGGOG00000025900 I
KLF9 Loxodonta africana ENSLAFG00000027506 I
Klf9 Rattus norvegicus ENSRNOG00000014215 I
KLF9 Procavia capensis ENSPCAG00000003811 I
KLF9 Otolemur garnettii ENSOGAG00000030356 I
KLF9 Oryctolagus cuniculus ENSOCUG00000006343 I
KLF9 Ornithorhynchus anatinus ENSOANG00000005024 I
KLF9 Pan troglodytes ENSPTRG00000040619 I
KLF9 Pteropus vampyrus ENSPVAG00000005970 I
KLF9 Tupaia belangeri ENSTBEG00000007044 I
Klf9 Mus musculus ENSMUSG00000033863 D
KLF9 Microcebus murinus ENSMICG00000001056 I
KLF9 Myotis lucifugus ENSMLUG00000002809 I
KLF9 Monodelphis domestica ENSMODG00000002760 I
KLF9 Sus scrofa ENSSSCG00000021646 I
LotgiG126249 Lottia gigantea LotgiG126249 I
Myotis_brandtii_KLF9_10034438 Myotis brandtii Myotis_brandtii_KLF9_10034438 I
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I
Ogr16901 Ophisaurus gracilis Ogr16901 I
Ogr17781 Ophisaurus gracilis Ogr17781 I
Pvit_02178 Pogona vitticeps Pvit_02178 I
Pvit_17363 Pogona vitticeps Pvit_17363 I
Sakowv30030659m.g Saccoglossus kowalevskii Sakowv30030659m.g N
SPU_023727 Strongylocentrotus purpuratus SPU_023727 N
Tal_R011003 Tyto alba Tal_R011003 I
TC000837 Tribolium castaneum TC000837 I
TriadG8990 Trichoplax adhaerens TriadG8990 N
zgc:153115 Gasterosteus aculeatus ENSGACG00000016005 I
zgc:153115 Danio rerio ENSDARG00000069342 N
zgc:153115 Takifugu rubripes ENSTRUG00000003801 I
zgc:153115 Tetraodon nigroviridis ENSTNIG00000007828 I