CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00147p00053080
(
Amborella trichopoda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AMTR_s00147p00053080
T191685_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN04353
GATA
106
141
CVDCNTTKTPLWRTGPAGPRSLCNACGIRYRKRRRM
Links
Other
GATA
family TFs
Other
Amborella trichopoda
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00057p00206030
Amborella trichopoda
AMTR_s00057p00206030
N
Aquca_017_00223
Aquilegia coerulea
Aquca_017_00223
N
BGIOSGA005119
Oryza indica
BGIOSGA005119
N
BRADI2G59937
Brachypodium distachyon
BRADI2G59937
N
cassava29582.valid.m1
Manihot esculenta
cassava29582.valid.m1
N
cassava29583.valid.m1
Manihot esculenta
cassava29583.valid.m1
N
Ciclev10018617m.g
Citrus clementina
Ciclev10018617m.g
N
GSMUA_Achr1G11230_001
Musa acuminata
GSMUA_Achr1G11230_001
N
LD
Vitis vinifera
VIT_07s0104g01580
N
LPERR01G37480
Leersia perrieri
LPERR01G37480
N
OB01G52060
Oryza brachyantha
OB01G52060
N
OBART01G43050
Oryza barthii
OBART01G43050
N
OGLUM01G47350
Oryza glumaepatula
OGLUM01G47350
N
OLONG_017231
Oryza longistaminata
OLONG_017231
N
ONIVA01G48990
Oryza nivara
ONIVA01G48990
N
OPUNC01G42000
Oryza punctata
OPUNC01G42000
N
ORGLA01G0367900
Oryza glaberrima
ORGLA01G0367900
N
ORUFI01G46480
Oryza rufipogon
ORUFI01G46480
N
OS01G0934300
Oryza sativa
OS01G0934300
N
PDK_20s1602441g001
Phoenix dactylifera
PDK_20s1602441g001
N
PK02496.1
Cannabis sativa
PK02496.1
N
POPTR_0002s20990
Populus trichocarpa
POPTR_0002s20990
N
POPTR_0014s12730
Populus trichocarpa
POPTR_0014s12730
N
SapurV1A.0155s0080
Salix purpurea
SapurV1A.0155s0080
N
Solyc09g074690.2
Solanum lycopersicum
Solyc09g074690.2
N
TCM_004566
Theobroma cacao
TCM_004566
N
Traes_3B_3142C10C9
Triticum aestivum
Traes_3B_3142C10C9
N
Traes_3DL_D4FBDA9DC
Triticum aestivum
Traes_3DL_D4FBDA9DC
N
TRIUR3_34541
Triticum urartu
TRIUR3_34541
N