SKUD_189609 (Saccharomyces kudriavzevii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF12550 (GCR1_C) IPR022210 SKUD_189609 T198630_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN1
M00913_2.00 		Saccharomyces cerevisiae
NWWTGTCCHN
NDGGACAWWN		 PBM
Gordan et al.(2011)
Msn1 		0.975 0.975
MSN1
M08567_2.00 		Saccharomyces cerevisiae
GTCCNHAT
ATDNGGAC		 Misc
DeBoer et al.(2011)
YOL116W_1376 		0.975 0.975
MSN1
M08568_2.00 		Saccharomyces cerevisiae
HATGTCCH
DGGACATD		 Misc
DeBoer et al.(2011)
YOL116W_1378 		0.975 0.975
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41642 GCR1 277 355

Links

Other GCR1 family TFs
Other Saccharomyces kudriavzevii TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004659 Ricinus communis 30076.m004659 I
30131.m007078 Ricinus communis 30131.m007078 I
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I
Bo6g079450 Brassica oleracea Bo6g079450 I
Bo8g097830 Brassica oleracea Bo8g097830 I
Bra003500 Brassica rapa Bra003500 I
Bra007679 Brassica rapa Bra007679 I
BZIP53 Arabidopsis thaliana AT3G62420 D
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I
Carubv10018852m.g Capsella rubella Carubv10018852m.g I
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I
cassava40461.m1 Manihot esculenta cassava40461.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
cassava9577.m1 Manihot esculenta cassava9577.m1 I
Ca_01004 Cicer arietinum Ca_01004 I
Ca_03512 Cicer arietinum Ca_03512 I
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Cla016748 Citrullus lanatus Cla016748 I
Cla016841 Citrullus lanatus Cla016841 I
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Cucsa.174700 Cucumis sativus Cucsa.174700 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
GLYMA03G37790 Glycine max GLYMA03G37790 I
GLYMA10G01640 Glycine max GLYMA10G01640 N
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA19G05050 Glycine max GLYMA19G05050 I
GLYMA19G40390 Glycine max GLYMA19G40390 I
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I
Lus10010005.g Linum usitatissimum Lus10010005.g I
Lus10025024.g Linum usitatissimum Lus10025024.g I
Lus10040428.g Linum usitatissimum Lus10040428.g I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000234798 Malus domestica MDP0000234798 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000437680 Malus domestica MDP0000437680 I
MDP0000949327 Malus domestica MDP0000949327 I
mgf003466m Mimulus guttatus mgf003466m I
mgf017392m Mimulus guttatus mgf017392m I
mgf018581m Mimulus guttatus mgf018581m I
mgf022473m Mimulus guttatus mgf022473m N
MTR_1g087040 Medicago truncatula MTR_1g087040 I
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
PK03779.1 Cannabis sativa PK03779.1 I
PK07533.1 Cannabis sativa PK07533.1 I
Pm002353 Prunus mume Pm002353 I
Pm015434 Prunus mume Pm015434 I
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I
Si023562m.g Setaria italica Si023562m.g N
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I
TCM_000835 Theobroma cacao TCM_000835 I
TCM_004807 Theobroma cacao TCM_004807 I
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I