ENSGALG00000002235 (Gallus gallus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSGALG00000002235 T199018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00		 Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.843 0.843
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.843 0.843
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.843 0.843
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.814 0.814
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.814 0.814
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.814 0.814
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.795 0.795
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.795 0.795
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.795 0.795
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.795 0.795
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.730 0.730
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.730 0.730
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.730 0.730
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.730 0.730
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.730 0.730
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.730 0.730
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.730 0.730
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.730 0.730
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.730 0.730
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02030_2.00 Grainyhead 6 222

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000003492 Grainyhead 44 260

Links

Other Grainyhead family TFs
Other Gallus gallus TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI06326 Xenopus laevis AAI06326 I 0.871
Aan_R001501 Calypte anna Aan_R001501 I 0.781
Aan_R003641 Calypte anna Aan_R003641 I 0.854
Aan_R009566 Calypte anna Aan_R009566 I 0.986
AAP78771 Xenopus laevis AAP78771 I 0.871
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.854
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.781
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.923
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.823
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.851
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.910
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.854
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.781
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.995
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.843
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.714
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.986
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.798
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.833
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.933
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.781
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.910
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.856
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.986
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.790
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.847
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.908
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.814
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.855
ENSECAG00000023454 Equus caballus ENSECAG00000023454 I 0.717
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.814
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.786
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.852
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.785
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.914
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.748
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.832
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.858
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.762
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.841
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.790
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.790
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.939
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.925
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.829
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.772
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.781
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.798
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.829
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.790
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.986
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.838
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.838
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.976
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.757
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.727
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.924
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.895
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.829
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.848
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.981
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.790
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.786
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.847
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.986
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.824
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.915
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.857
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.785
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.871
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.986
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.847
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.790
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.836
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.850
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.918
ENSSHAG00000000283 Sarcophilus harrisii ENSSHAG00000000283 I 0.752
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.981
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.810
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.824
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.743
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.862
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.895
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.771
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.819
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.969
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.824
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.833
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.924
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.843
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.781
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.957
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.824
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.976
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.852
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.780
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.710
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.958
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.948
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.833
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.990
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.705
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.865
Tal_R010177 Tyto alba Tal_R010177 I 0.986
Tal_R011103 Tyto alba Tal_R011103 I 0.854
Tal_R012945 Tyto alba Tal_R012945 I 0.781
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.826
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.976
TFCP2 Bos taurus ENSBTAG00000019312 I 0.981
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.986
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.986
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.886
tfcp2 Danio rerio ENSDARG00000060306 I 0.929
TFCP2 Equus caballus ENSECAG00000020650 I 0.986
TFCP2 Felis catus ENSFCAG00000030292 I 0.986
TFCP2 Homo sapiens ENSG00000135457 D 0.986
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.943
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.976
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.981
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.986
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.967
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.824
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.986
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.972
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.938
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.843
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.986
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.895
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.976
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.853
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.967
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.967
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.886
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.881
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.848
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.833
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.838
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.829
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.819
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.710
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.829
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.762
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.838
TFCP2L1 Homo sapiens ENSG00000115112 D 0.847
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.857
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.847
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.842
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.848
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.829
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.733
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.795
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.862
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.848
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.838
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.847
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.833
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.824
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.838
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.843
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.705
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.829
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.841
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.781
UBP1 Bos taurus ENSBTAG00000003968 I 0.786
UBP1 Canis familiaris ENSCAFG00000004598 I 0.798
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.790
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.790
ubp1 Danio rerio ENSDARG00000018000 I 0.794
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.843
UBP1 Equus caballus ENSECAG00000018555 I 0.852
UBP1 Echinops telfairi ENSETEG00000016510 I 0.837
UBP1 Felis catus ENSFCAG00000006123 I 0.852
UBP1 Homo sapiens ENSG00000153560 D 0.795
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.748
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.847
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.790
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.790
Ubp1 Mus musculus ENSMUSG00000009741 I 0.789
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.771
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.790
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.793
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.786
ubp1 Oryzias latipes ENSORLG00000011706 I 0.829
UBP1 Procavia capensis ENSPCAG00000008237 I 0.846
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.790
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.790
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.790
UBP1 Sorex araneus ENSSARG00000008670 I 0.843
UBP1 Sus scrofa ENSSSCG00000011235 I 0.857
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.838
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.829
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.851