POPTR_0001s00480 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0001s00480 T201160_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s00480.1 GRAS 414 776

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29916.m000544 Ricinus communis 29916.m000544 N 0.858
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.895
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.828
Cla005738 Citrullus lanatus Cla005738 N 0.827
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.827
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.839
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.800
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N 0.707
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.761
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.781
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.859
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.851
MDP0000275704 Malus domestica MDP0000275704 N 0.807
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.795
PK22905.1 Cannabis sativa PK22905.1 N 0.791
Pm023512 Prunus mume Pm023512 N 0.842
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.942
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.839
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.947
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.889
TCM_015991 Theobroma cacao TCM_015991 N 0.803
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.758