CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000714
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm000714
T201946_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000714
GRAS
310
682
LCKLLTECAQAVGSYDQQSASELLKQIRQHSSPYGYATQRLAHYFAEGLEARLAGARSLSYPPLLFMHTSTTEILKAYQVYVSACPFKKMLHFFANRTIMKQTEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITAIELPQPGFRPAERIEETGRRLAKYSERYGVPFEYNVIAKKWETIGLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYEATVPRDDEHRLLFERAIFGRDIKNVIACEGLERVERPETYKQWQARYVRAGFEQLPLDRELFKKVKTMSKMMGYHKDFGIEDDGEWMLQGWKGRIILALSALK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30204.m001750
Ricinus communis
30204.m001750
N
AMTR_s00029p00248140
Amborella trichopoda
AMTR_s00029p00248140
N
AMTR_s00045p00026940
Amborella trichopoda
AMTR_s00045p00026940
N
Bo3g083740
Brassica oleracea
Bo3g083740
N
Bo7g031610
Brassica oleracea
Bo7g031610
N
Bostr.19424s0133
Boechera stricta
Bostr.19424s0133
N
Bostr.2021s0055
Boechera stricta
Bostr.2021s0055
N
Bra013238
Brassica rapa
Bra013238
N
BRADI2G14372
Brachypodium distachyon
BRADI2G14372
N
Carubv10015863m.g
Capsella rubella
Carubv10015863m.g
N
Carubv10016123m.g
Capsella rubella
Carubv10016123m.g
N
cassava349.valid.m1
Manihot esculenta
cassava349.valid.m1
N
chr1.LjT36F23.70.nd
Lotus japonicus
chr1.LjT36F23.70.nd
N
Ciclev10018446m.g
Citrus clementina
Ciclev10018446m.g
N
Cla015187
Citrullus lanatus
Cla015187
N
Cucsa.078210
Cucumis sativus
Cucsa.078210
N
EAF1A
Arabidopsis thaliana
AT3G24880
N
EAF1B
Arabidopsis thaliana
AT3G24870
N
Eucgr.H00795
Eucalyptus grandis
Eucgr.H00795
N
evm.TU.supercontig_8.144
Carica papaya
evm.TU.supercontig_8.144
N
fgenesh2_kg.3__2706__AT3G24880.1
Arabidopsis lyrata
fgenesh2_kg.3__2706__AT3G24880.1
N
gene17608-v1.0-hybrid
Fragaria vesca
gene17608-v1.0-hybrid
N
GLYMA03G18725
Glycine max
GLYMA03G18725
N
GLYMA08G46710
Glycine max
GLYMA08G46710
N
GLYMA16G14060
Glycine max
GLYMA16G14060
N
GLYMA18G36628
Glycine max
GLYMA18G36628
N
Gorai.001G187100
Gossypium raimondii
Gorai.001G187100
N
Gorai.001G233800
Gossypium raimondii
Gorai.001G233800
N
Gorai.004G226000
Gossypium raimondii
Gorai.004G226000
N
Gorai.007G155000
Gossypium raimondii
Gorai.007G155000
N
GRMZM2G018048
Zea mays
GRMZM2G018048
N
GRMZM2G350684
Zea mays
GRMZM2G350684
N
GSMUA_Achr11G13340_001
Musa acuminata
GSMUA_Achr11G13340_001
N
GSMUA_Achr1G21080_001
Musa acuminata
GSMUA_Achr1G21080_001
N
Lus10011850.g
Linum usitatissimum
Lus10011850.g
N
Lus10022788.g
Linum usitatissimum
Lus10022788.g
N
MDP0000155726
Malus domestica
MDP0000155726
N
MDP0000250529
Malus domestica
MDP0000250529
N
MTR_7g056603
Medicago truncatula
MTR_7g056603
N
orange1.1g000147m.g
Citrus sinensis
orange1.1g000147m.g
N
Pavir.J00429
Panicum virgatum
Pavir.J00429
N
Pavir.J03231
Panicum virgatum
Pavir.J03231
N
PDK_20s1355591g002
Phoenix dactylifera
PDK_20s1355591g002
N
PK23540.1
Cannabis sativa
PK23540.1
N
Pm020347
Prunus mume
Pm020347
N
POPTR_0002s24490
Populus trichocarpa
POPTR_0002s24490
N
POPTR_0014s19020
Populus trichocarpa
POPTR_0014s19020
N
PRUPE_ppa000065mg
Prunus persica
PRUPE_ppa000065mg
N
SapurV1A.0135s0340
Salix purpurea
SapurV1A.0135s0340
N
SapurV1A.0342s0100
Salix purpurea
SapurV1A.0342s0100
N
Si020947m.g
Setaria italica
Si020947m.g
N
Solyc06g083420.1
Solanum lycopersicum
Solyc06g083420.1
N
Solyc09g060080.2
Solanum lycopersicum
Solyc09g060080.2
N
TCM_002924
Theobroma cacao
TCM_002924
N
Thhalv10002368m.g
Eutrema salsugineum
Thhalv10002368m.g
N
VIT_07s0005g06680
Vitis vinifera
VIT_07s0005g06680
N