CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
28650.m000187
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
28650.m000187
T201997_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28650.m000187
GRAS
313
684
LSTLLAQCAQSVSISDHRTATELLRQIRQHSSPYGDGNQRLAHYFANALETRLAGTGTPAYSPLLSSKTPVSDILKAYQVYVKACPFKRMSNFFANQTIFKLAEKATRLHIIDFGVLYGFQWPCLIQRLSQRPGGPPKLRITGIELPQPGFRPAERVEETGRRLQRYCERFNVPFKYHAVAQKWETIKYEDLNIDRGEMTVVNCLYRLRNLPDDTVVANSARDAVLKLIRKIRPDIFIHGVINGTYNAPFFVTRFREALFYYSALFDMFEINVPREDDQRMLYEKAIFGRDIMNVIACEGAERVERPETYKQWQVRNLRAGFRQLSLDQEILKKVRCTVRSEYHKDFVVDENGRWMLQGWKGRVISALSVWK
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29742.m001397
Ricinus communis
29742.m001397
N
Bo4g083590
Brassica oleracea
Bo4g083590
N
Cagra.0996s0001
Capsella grandiflora
Cagra.0996s0001
N
Cagra.1226s0063
Capsella grandiflora
Cagra.1226s0063
N
Carubv10006513m.g
Capsella rubella
Carubv10006513m.g
N
Carubv10022415m.g
Capsella rubella
Carubv10022415m.g
N
Cla001927
Citrullus lanatus
Cla001927
N
Cla015243
Citrullus lanatus
Cla015243
N
Cucsa.183410
Cucumis sativus
Cucsa.183410
N
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
GLYMA12G28550
Glycine max
GLYMA12G28550
N
GSMUA_Achr2G19760_001
Musa acuminata
GSMUA_Achr2G19760_001
N
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
mgf024961m
Mimulus guttatus
mgf024961m
N
MTR_8g027440
Medicago truncatula
MTR_8g027440
N
OGLUM02G20880
Oryza glumaepatula
OGLUM02G20880
N
PDK_20s1502991g001
Phoenix dactylifera
PDK_20s1502991g001
N
Sb04g022830
Sorghum bicolor
Sb04g022830
N
TCM_027113
Theobroma cacao
TCM_027113
I