orange1.1g008984m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g008984m.g T202931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g008984m GRAS 177 547
orange1.1g008988m GRAS 177 547

Links

Other GRAS family TFs
Other Citrus sinensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27529.m000047 Ricinus communis 27529.m000047 N 0.759
Bostr.30275s0178 Boechera stricta Bostr.30275s0178 N 0.705
Cagra.3356s0014 Capsella grandiflora Cagra.3356s0014 N 0.710
Carubv10004566m.g Capsella rubella Carubv10004566m.g N 0.710
Ca_07887 Cicer arietinum Ca_07887 N 0.745
Ca_20223 Cicer arietinum Ca_20223 N 0.748
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N 0.734
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N 0.745
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.997
Cla014623 Citrullus lanatus Cla014623 N 0.721
Cucsa.044690 Cucumis sativus Cucsa.044690 N 0.718
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N 0.759
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.767
GLYMA07G39650 Glycine max GLYMA07G39650 N 0.743
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.756
GLYMA15G12320 Glycine max GLYMA15G12320 N 0.770
GLYMA17G01150 Glycine max GLYMA17G01150 N 0.729
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N 0.772
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N 0.767
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.770
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.770
MDP0000254936 Malus domestica MDP0000254936 N 0.748
mgf007403m Mimulus guttatus mgf007403m N 0.702
MTR_4g133660 Medicago truncatula MTR_4g133660 N 0.729
PGSC0003DMG400013356 Solanum tuberosum PGSC0003DMG400013356 N 0.721
PK04573.1 Cannabis sativa PK04573.1 N 0.715
Pm012494 Prunus mume Pm012494 N 0.748
POPTR_0006s01720 Populus trichocarpa POPTR_0006s01720 N 0.734
POPTR_0016s01110 Populus trichocarpa POPTR_0016s01110 N 0.770
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N 0.753
SapurV1A.0359s0250 Salix purpurea SapurV1A.0359s0250 N 0.753
SapurV1A.0823s0110 Salix purpurea SapurV1A.0823s0110 N 0.764
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.734
SCL13 Arabidopsis thaliana AT4G17230 N 0.705
Solyc11g012510.1 Solanum lycopersicum Solyc11g012510.1 N 0.718
TCM_030393 Theobroma cacao TCM_030393 N 0.791
Thhalv10024887m.g Eutrema salsugineum Thhalv10024887m.g N 0.707