Bo3g143570 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo3g143570 T204901_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.827 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g143570.1 Homeodomain 37 93

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_05510 Schistosoma haematobium A_05510 N 0.000
csin110255 Clonorchis sinensis csin110255 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
D915_15256 Fasciola hepatica D915_15256 N 0.000
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
ECANG7_05481 Echinococcus canadensis ECANG7_05481 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.000
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.000
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
Smp_103530 Schistosoma mansoni Smp_103530 N 0.000
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.000
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
T265_14643 Opisthorchis viverrini T265_14643 N 0.000
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.000
TsM_000088100 Taenia solium TsM_000088100 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
TTAC_0000194001 Hydatigera taeniaeformis TTAC_0000194001 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000