TCM_012755 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_012755 T223902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.740 0.754
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.740 0.754
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.618 0.439
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.618 0.439
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.618 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY21297 Homeodomain 72 133
EOY21298 Homeodomain 72 133

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

580 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP001291 Anopheles gambiae AGAP001291 I
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I
BXY_1106000 Bursaphelenchus xylophilus BXY_1106000 I
CJA16978 Caenorhabditis japonica CJA16978 I
CRE00505 Caenorhabditis remanei CRE00505 I
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I
ENSPFOG00000023954 Poecilia formosa ENSPFOG00000023954 I
ENSPSIG00000011885 Pelodiscus sinensis ENSPSIG00000011885 I
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I
ENSXMAG00000014868 Xiphophorus maculatus ENSXMAG00000014868 I
GA10924 Drosophila pseudoobscura FBgn0070980 I
GD19752 Drosophila simulans FBgn0191241 I
GF18915 Drosophila ananassae FBgn0095929 I
GG12590 Drosophila erecta FBgn0104878 I
GH23039 Drosophila grimshawi FBgn0130496 I
GI10245 Drosophila mojavensis FBgn0133010 I
GJ11051 Drosophila virilis FBgn0198317 I
GK13239 Drosophila willistoni FBgn0215248 I
GL21621 Drosophila persimilis FBgn0159214 I
GM10780 Drosophila sechellia FBgn0165726 I
KGM_22387 Danaus plexippus KGM_22387 I
MDOA000052 Musca domestica MDOA000052 I
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I
NV11451 Nasonia vitripennis NV11451 I
opa Drosophila melanogaster FBgn0003002 D
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I
ref-2 Caenorhabditis elegans WBGene00004335 D
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I
tetur11g00650 Tetranychus urticae tetur11g00650 I
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I
zic6 Danio rerio ENSDARG00000071496 I