RSKR_0000763400 (Rhabditophanes kr3021)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 RSKR_0000763400 T235854_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ceh-53
M00679_2.00 		Caenorhabditis elegans
HTAATCYN
NRGATTAD		 PBM
Narasimhan et al.(2015)
pTH10699 		0.788 0.649
NEMVEDRAFT_v1g113057
M02144_2.00 		Nematostella vectensis
NYTAATCCBN
NVGGATTARN		 PBM
Weirauch et al.(2014)
pTH6135 		0.785 0.561
Dmbx1
M00441_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Dmbx1_2277 		0.783 0.614
DMBX1
M03236_2.00 		Homo sapiens
NHTAATCCBN
NVGGATTADN		 SELEX
Jolma et al.(2013)
DMBX1_1 		0.783 0.614
DMBX1
M05383_2.00 		Homo sapiens
NTAATCSN
NSGATTAN		 SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX 		0.783 0.614
DMBX1
M05384_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX 		0.783 0.614
CRX
M00274_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_REF 		0.777 0.614
Crx
M00489_2.00 		Mus musculus
NWAAKMBN
NVKMTTWN		 PBM
Berger et al.(2008)
Crx_3485 		0.777 0.614
CRX
M04949_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX 		0.777 0.614
Crx
M08139_2.00 		Mus musculus
YTAATCCYCYY
RRGRGGATTAR		 ChIP-seq
Mathelier et al.(2014)
MA0467.1 		0.777 0.614
CRX
M09132_2.00 		Homo sapiens
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B 		0.777 0.614
Crx
M09208_2.00 		Mus musculus
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A 		0.777 0.614
Crx
M09577_2.00 		Mus musculus
NYTAATCC
GGATTARN		 Misc
Heinz et al.(2010)
Retina-Crx_GSE20012 		0.777 0.614
CRX
M10647_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_01 		0.777 0.614
CRX
M10648_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_02 		0.777 0.614
CRX
M04950_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX 		0.777 0.614
ceh-37
M00674_2.00 		Caenorhabditis elegans
HTAATCYN
NRGATTAD		 PBM
Narasimhan et al.(2015)
pTH10716 		0.777 0.561
CRX
M00275_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_V66I 		0.767 0.596
CRX
M00273_2.00 		Homo sapiens
NNYTAATCCVN
NBGGATTARNN		 PBM
Barrera et al.(2016)
CRX_R90W 		0.766 0.596
Otx1
M00396_2.00 		Mus musculus
NTAAKCYN
NRGMTTAN		 PBM
Berger et al.(2008)
Otx1_2325 		0.764 0.579
OTX1
M03116_2.00 		Homo sapiens
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
OTX1_1 		0.764 0.579
OTX1
M03117_2.00 		Homo sapiens
NTAATCSB
VSGATTAN		 SELEX
Jolma et al.(2013)
OTX1_2 		0.764 0.579
Otx1
M03249_2.00 		Mus musculus
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
Otx1_1 		0.764 0.579
Otx1
M03250_2.00 		Mus musculus
NTAATCCN
NGGATTAN		 SELEX
Jolma et al.(2013)
Otx1_2 		0.764 0.579
OTX1
M05022_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX 		0.764 0.579
OTX1
M05024_2.00 		Homo sapiens
NTAATCCNNN
NNNGGATTAN		 SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX 		0.764 0.579
OTX1
M10673_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX1_Q5 		0.764 0.579
OTX1
M05023_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX 		0.764 0.579
OTX1
M05025_2.00 		Homo sapiens
HTAATCCNHN
NDNGGATTAD		 SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX 		0.764 0.579
Otx2
M00418_2.00 		Mus musculus
NTAAKMBN
NVKMTTAN		 PBM
Berger et al.(2008)
Otx2_3441 		0.764 0.561
OTX2
M03197_2.00 		Homo sapiens
NHTAAKCGGATTANN
NNTAATCCGMTTADN		 SELEX
Jolma et al.(2013)
OTX2_1 		0.764 0.561
OTX2
M03198_2.00 		Homo sapiens
HTAATCCB
VGGATTAD		 SELEX
Jolma et al.(2013)
OTX2_2 		0.764 0.561
oc
M03808_2.00 		Drosophila melanogaster
HTAATCCB
VGGATTAD		 SELEX
Nitta et al.(2015)
oc_1 		0.764 0.561
OTX2
M05251_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX 		0.764 0.561
oc
M06502_2.00 		Drosophila melanogaster
TAATCC
GGATTA		 B1H
Mathelier et al.(2014)
MA0234.1 		0.764 0.561
oc
M06282_2.00 		Drosophila melanogaster
WTAATCC
GGATTAW		 B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102 		0.764 0.561
oc
M06283_2.00 		Drosophila melanogaster
NTAATCCB
VGGATTAN		 B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102 		0.764 0.561
OTX2
M09153_2.00 		Homo sapiens
BYTAATCCYYN
NRRGGATTARV		 Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A 		0.764 0.561
Otx2
M09183_2.00 		Mus musculus
HTAATCCYNYNN
NNRNRGGATTAD		 Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A 		0.764 0.561
Otx2
M09569_2.00 		Mus musculus
NHTAATCCHB
VDGGATTADN		 Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098 		0.764 0.561
oc
M09681_2.00 		Drosophila melanogaster
HTAATCCN
NGGATTAD		 Misc
Kulakovskiy et al.(2009)
oc 		0.764 0.561
OTX2
M10727_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3_01 		0.764 0.561
OTX2
M10728_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3 		0.764 0.561
OTX2
M05252_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX 		0.764 0.561
Gsc
M00411_2.00 		Mus musculus
NNTAATYBN
NVRATTANN		 PBM
Berger et al.(2008)
Gsc_2327 		0.763 0.544
GSC
M03146_2.00 		Homo sapiens
NHTAATCCNH
DNGGATTADN		 SELEX
Jolma et al.(2013)
GSC_1 		0.763 0.544
GSC
M05134_2.00 		Homo sapiens
NTAATCCB
VGGATTAN		 SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX 		0.763 0.544
GSC
M05136_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX 		0.763 0.544
gsc
M09584_2.00 		Xenopus tropicalis
NTAATCYN
NRGATTAN		 Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576 		0.763 0.544
GSC
M05135_2.00 		Homo sapiens
HTAATCCB
VGGATTAD		 SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX 		0.763 0.544
GSC
M05137_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX 		0.763 0.544
ceh-36
M00673_2.00 		Caenorhabditis elegans
NWAATCYN
NRGATTWN		 PBM
Narasimhan et al.(2015)
pTH10730 		0.762 0.649
CRX
M00270_2.00 		Homo sapiens
NWDAKNN
NNMTHWN		 PBM
Barrera et al.(2016)
CRX_E80A 		0.756 0.596
HBX4_ECHGR
M02195_2.00 		Echinococcus granulosus
NHTAATCYNN
NNRGATTADN		 PBM
Weirauch et al.(2014)
pTH6301 		0.750 0.509
GSC2
M03080_2.00 		Homo sapiens
NHTAATCCBH
DVGGATTADN		 SELEX
Jolma et al.(2013)
GSC2_1 		0.748 0.579
GSC2
M04920_2.00 		Homo sapiens
NTAATNNN
NNNATTAN		 SELEX
Yin et al.(2017)
GSC2_eDBD_HT-SELEX 		0.748 0.579
GSC2
M04921_2.00 		Homo sapiens
NTAATCYN
NRGATTAN		 SELEX
Yin et al.(2017)
GSC2_eDBD_Methyl-HT-SELEX 		0.748 0.579
CRX
M00271_2.00 		Homo sapiens
NHDAKNN
NNMTHDN		 PBM
Barrera et al.(2016)
CRX_R41Q 		0.744 0.596
CRX
M00272_2.00 		Homo sapiens
NNHNATNN
NNATNDNN		 PBM
Barrera et al.(2016)
CRX_R41W 		0.744 0.596
Gsc
M02120_2.00 		Drosophila melanogaster
NTAATCYN
NRGATTAN		 PBM
Weirauch et al.(2014)
pTH5511 		0.737 0.544
Gsc
M03817_2.00 		Drosophila melanogaster
TAATCCB
VGGATTA		 SELEX
Nitta et al.(2015)
Gsc_1 		0.737 0.544
Gsc
M03818_2.00 		Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA		 SELEX
Nitta et al.(2015)
Gsc_2 		0.737 0.544
Gsc
M03819_2.00 		Drosophila melanogaster
TAATCYNHTAATCBN
NVGATTADNRGATTA		 SELEX
Nitta et al.(2015)
Gsc_3 		0.737 0.544
Gsc
M03820_2.00 		Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA		 SELEX
Nitta et al.(2015)
Gsc_4 		0.737 0.544
Gsc
M03821_2.00 		Drosophila melanogaster
TAATCYNWTWATCYB
VRGATWAWNRGATTA		 SELEX
Nitta et al.(2015)
Gsc_5 		0.737 0.544
Gsc
M05873_2.00 		Drosophila melanogaster
TAATCSNHTWA
TWADNSGATTA		 SMiLE-seq
Isakova et al.(2017)
Gsc 		0.737 0.544
Gsc
M06509_2.00 		Drosophila melanogaster
TAATCY
RGATTA		 B1H
Mathelier et al.(2014)
MA0190.1 		0.737 0.544
Gsc
M06297_2.00 		Drosophila melanogaster
VNTAATCY
RGATTANB		 B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323 		0.737 0.544
Gsc
M06298_2.00 		Drosophila melanogaster
NTAATCY
RGATTAN		 B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323 		0.737 0.544
CBG01820
M01241_2.00 		Caenorhabditis briggsae
NTAATCCN
NGGATTAN		 PBM
Lambert et al.(2019)
pTH11454 		0.729 0.526
PITX2
M00313_2.00 		Homo sapiens
NWAAKHYN
NRDMTTWN		 PBM
Barrera et al.(2016)
PITX2_REF 		0.723 0.544
Pitx3
M00428_2.00 		Mus musculus
NTAAKCYN
NRGMTTAN		 PBM
Berger et al.(2008)
Pitx3_3497 		0.723 0.544
Pitx2
M00440_2.00 		Mus musculus
NTAATCCN
NGGATTAN		 PBM
Berger et al.(2008)
Pitx2_2274 		0.723 0.544
Ptx1
M02123_2.00 		Drosophila melanogaster
NTAATCYNN
NNRGATTAN		 PBM
Weirauch et al.(2014)
pTH5644 		0.723 0.544
Ptx1
M00562_2.00 		Drosophila melanogaster
NYTAATCCBN
NVGGATTARN		 PBM
Busser et al.(2012a)
Ptx1 		0.723 0.544
PITX3
M03111_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX3_1 		0.723 0.544
Ptx1
M03842_2.00 		Drosophila melanogaster
NTAATCCN
NGGATTAN		 SELEX
Nitta et al.(2015)
Ptx1_1 		0.723 0.544
Ptx1
M03843_2.00 		Drosophila melanogaster
NTAATCCN
NGGATTAN		 SELEX
Nitta et al.(2015)
Ptx1_2 		0.723 0.544
Ptx1
M03844_2.00 		Drosophila melanogaster
NCGHTAATCCN
NGGATTADCGN		 SELEX
Nitta et al.(2015)
Ptx1_3 		0.723 0.544
PITX2
M05229_2.00 		Homo sapiens
NTAAKCCN
NGGMTTAN		 SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX 		0.723 0.544
PITX2
M05231_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX 		0.723 0.544
PITX3
M04997_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX 		0.723 0.544
Ptx1
M06521_2.00 		Drosophila melanogaster
YTAATCC
GGATTAR		 B1H
Mathelier et al.(2014)
MA0201.1 		0.723 0.544
Ptx1
M06319_2.00 		Drosophila melanogaster
YTAATCC
GGATTAR		 B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912 		0.723 0.544
Ptx1
M06320_2.00 		Drosophila melanogaster
NYTAATCC
GGATTARN		 B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912 		0.723 0.544
PITX2
M10720_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q2 		0.723 0.544
PITX2
M10721_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q4 		0.723 0.544
PITX2
M10722_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX2_Q6 		0.723 0.544
PITX3
M10660_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q2 		0.723 0.544
PITX3
M10661_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q3_01 		0.723 0.544
PITX3
M10662_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX3_Q3 		0.723 0.544
PITX2
M00311_2.00 		Homo sapiens
TTAATCCY
RGGATTAA		 PBM
Barrera et al.(2016)
PITX2_R108H 		0.723 0.544
PITX2
M00312_2.00 		Homo sapiens
NNNTATWAATTNN
NNAATTWATANNN		 PBM
Barrera et al.(2016)
PITX2_R130W 		0.723 0.544
PITX2
M00314_2.00 		Homo sapiens
NTAATMYN
NRKATTAN		 PBM
Barrera et al.(2016)
PITX2_T114P 		0.723 0.544
PITX2
M05230_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX 		0.723 0.544
PITX2
M05232_2.00 		Homo sapiens
YTAATCCY
RGGATTAR		 SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX 		0.723 0.544
PITX3
M04998_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX 		0.723 0.544
Pitx1
M00415_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Pitx1_2312 		0.723 0.526
PITX1
M03082_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX1_1 		0.723 0.526
PITX1
M03083_2.00 		Homo sapiens
NHTAATCCN
NGGATTADN		 SELEX
Jolma et al.(2013)
PITX1_2 		0.723 0.526
PITX1
M03084_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Jolma et al.(2013)
PITX1_3 		0.723 0.526
PITX1
M04928_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX 		0.723 0.526
PITX1
M04930_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX 		0.723 0.526
Pitx1
M09182_2.00 		Mus musculus
NYWAAKCCYH
DRGGMTTWRN		 Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C 		0.723 0.526
PITX1
M10640_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX1_Q4 		0.723 0.526
PITX1
M10641_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PITX1_Q6 		0.723 0.526
PITX2
M00310_2.00 		Homo sapiens
HTAATCYN
NRGATTAD		 PBM
Barrera et al.(2016)
PITX2_L100Q 		0.723 0.526
PITX1
M04929_2.00 		Homo sapiens
NTAAKCCN
NGGMTTAN		 SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX 		0.723 0.526
PITX1
M04931_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX 		0.723 0.526
DPRX
M03237_2.00 		Homo sapiens
NHTAATCYNN
NNRGATTADN		 SELEX
Jolma et al.(2013)
DPRX_1 		0.672 0.386
DPRX
M03238_2.00 		Homo sapiens
NRGMTAATCYN
NRGATTAKCYN		 SELEX
Jolma et al.(2013)
DPRX_2 		0.672 0.386
DPRX
M05388_2.00 		Homo sapiens
VGMTAATCYN
NRGATTAKCB		 SELEX
Yin et al.(2017)
DPRX_eDBD_HT-SELEX 		0.672 0.386
DPRX
M05389_2.00 		Homo sapiens
AGATMATCYN
NRGATKATCT		 SELEX
Yin et al.(2017)
DPRX_eDBD_Methyl-HT-SELEX 		0.672 0.386
AGAP006642
M02035_2.00 		Anopheles gambiae
NHTAATCY
RGATTADN		 PBM
Weirauch et al.(2014)
pTH6201 		0.645 0.368
dve
M02122_2.00 		Drosophila melanogaster
NTAATCCV
BGGATTAN		 PBM
Weirauch et al.(2014)
pTH6218 		0.645 0.368
Obox6
M00490_2.00 		Mus musculus
NTAATCYNN
NNRGATTAN		 PBM
Berger et al.(2008)
Obox6_3440 		0.637 0.386
dharma
M02080_2.00 		Danio rerio
NNRAKCY
RGMTYNN		 PBM
Weirauch et al.(2014)
pTH6530 		0.630 0.439
Obox1
M00515_2.00 		Mus musculus
NTAATCYNNN
NNNRGATTAN		 PBM
Berger et al.(2008)
Obox1_3970 		0.600 0.386
Obox5
M00527_2.00 		Mus musculus
NTWATHNN
NNDATWAN		 PBM
Berger et al.(2008)
Obox5_2284 		0.600 0.386
Obox5
M00528_2.00 		Mus musculus
NWDATHNN
NNDATHWN		 PBM
Berger et al.(2008)
Obox5_3963 		0.600 0.386
Obox3
M00523_2.00 		Mus musculus
NWWATMN
NKATWWN		 PBM
Berger et al.(2008)
Obox3_3439 		0.600 0.368
RHOXF1
M03089_2.00 		Homo sapiens
RGATNAKCY
RGMTNATCY		 SELEX
Jolma et al.(2013)
RHOXF1_1 		0.600 0.456
RHOXF1
M03090_2.00 		Homo sapiens
NTRAKCCN
NGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_2 		0.600 0.456
RHOXF1
M03091_2.00 		Homo sapiens
VGMTHAKCC
GGMTDAKCB		 SELEX
Jolma et al.(2013)
RHOXF1_3 		0.600 0.456
RHOXF1
M03092_2.00 		Homo sapiens
NTRAKCCH
DGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_4 		0.600 0.456
RHOXF1
M04947_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX 		0.600 0.456
RHOXF1
M04948_2.00 		Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX 		0.600 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000763400.1 Homeodomain 80 136

Links

Other Homeodomain family TFs
Other Rhabditophanes kr3021 TFs

1147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.000
ANAC050 Arabidopsis thaliana AT3G10480 D 0.000
ANAC052 Arabidopsis thaliana AT3G10490 I 0.000
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.000
BGIOSGA009316 Oryza indica BGIOSGA009316 I 0.000
BGIOSGA026481 Oryza indica BGIOSGA026481 I 0.000
Bo1g143840 Brassica oleracea Bo1g143840 I 0.000
Bo1g143850 Brassica oleracea Bo1g143850 I 0.000
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.000
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.000
Bra001366 Brassica rapa Bra001366 I 0.000
Bra034118 Brassica rapa Bra034118 I 0.000
Bra034119 Brassica rapa Bra034119 I 0.000
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.000
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I 0.000
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.000
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.000
Cagra.9217s0020 Capsella grandiflora Cagra.9217s0020 I 0.000
Carubv10003768m.g Capsella rubella Carubv10003768m.g I 0.000
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.000
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.000
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.000
Ca_08371 Cicer arietinum Ca_08371 I 0.000
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.000
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.000
Cla020838 Citrullus lanatus Cla020838 I 0.000
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.000
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.000
F775_27564 Aegilops tauschii F775_27564 I 0.000
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.000
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.000
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.000
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.000
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.000
GRMZM2G113950 Zea mays GRMZM2G113950 I 0.000
GRMZM2G125777 Zea mays GRMZM2G125777 I 0.000
LPERR02G31180 Leersia perrieri LPERR02G31180 N 0.000
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.000
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.000
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.000
mgf000623m Mimulus guttatus mgf000623m I 0.000
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.000
OB02G44540 Oryza brachyantha OB02G44540 I 0.000
OB08G30590 Oryza brachyantha OB08G30590 I 0.000
OBART02G37700 Oryza barthii OBART02G37700 I 0.000
OBART08G23760 Oryza barthii OBART08G23760 I 0.000
OGLUM02G38880 Oryza glumaepatula OGLUM02G38880 I 0.000
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I 0.000
OLONG_023179 Oryza longistaminata OLONG_023179 I 0.000
OMERI08G18580 Oryza meridionalis OMERI08G18580 I 0.000
ONIVA02G40500 Oryza nivara ONIVA02G40500 I 0.000
ONIVA08G26810 Oryza nivara ONIVA08G26810 I 0.000
OPUNC02G34910 Oryza punctata OPUNC02G34910 I 0.000
OPUNC08G21700 Oryza punctata OPUNC08G21700 I 0.000
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.000
ORGLA02G0329400 Oryza glaberrima ORGLA02G0329400 I 0.000
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I 0.000
ORUFI02G39260 Oryza rufipogon ORUFI02G39260 I 0.000
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I 0.000
OS02G0822400 Oryza sativa OS02G0822400 I 0.000
OS08G0562200 Oryza sativa OS08G0562200 I 0.000
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I 0.000
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I 0.000
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.000
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.000
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.000
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.000
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.000
Sb04g037720 Sorghum bicolor Sb04g037720 I 0.000
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.000
Si013361m.g Setaria italica Si013361m.g I 0.000
Si016620m.g Setaria italica Si016620m.g I 0.000
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.000
TCM_043357 Theobroma cacao TCM_043357 I 0.000
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.000
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.000
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I 0.000
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.000
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.000
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.000
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.000