SMTD_0002076601 (Schistosoma mattheei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMTD_0002076601 T236164_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pdm3
M02127_2.00 		Drosophila melanogaster
CTAATTAN
NTAATTAG		 PBM
Weirauch et al.(2014)
pTH6769 		0.631 0.482
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.603 0.482
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0002076601-mRNA-1 Homeodomain 40 95

Links

Other Homeodomain family TFs
Other Schistosoma mattheei TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008836 Ricinus communis 30174.m008836 N
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N
AT3G60670 Arabidopsis thaliana AT3G60670 N
Bostr.13158s0066 Boechera stricta Bostr.13158s0066 N
Cagra.6011s0013 Capsella grandiflora Cagra.6011s0013 N
Carubv10019494m.g Capsella rubella Carubv10019494m.g N
cassava14439.m1 Manihot esculenta cassava14439.m1 N
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N
Cla006768 Citrullus lanatus Cla006768 N
Cucsa.120560 Cucumis sativus Cucsa.120560 N
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N
Eucgr.E01501 Eucalyptus grandis Eucgr.E01501 N
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N
fgenesh2_kg.5__2532__AT3G60670.1 Arabidopsis lyrata fgenesh2_kg.5__2532__AT3G60670.1 N
GLYMA01G17580 Glycine max GLYMA01G17580 N
GLYMA09G05781 Glycine max GLYMA09G05781 N
GLYMA11G17770 Glycine max GLYMA11G17770 N
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N
Lus10009283.g Linum usitatissimum Lus10009283.g N
Lus10015881.g Linum usitatissimum Lus10015881.g N
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N
Pm017841 Prunus mume Pm017841 N
POPTR_0002s14570 Populus trichocarpa POPTR_0002s14570 N
POPTR_0014s05840 Populus trichocarpa POPTR_0014s05840 N
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N
SapurV1A.0033s0510 Salix purpurea SapurV1A.0033s0510 N
SapurV1A.0382s0270 Salix purpurea SapurV1A.0382s0270 N
Sb04g004830 Sorghum bicolor Sb04g004830 N
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N
TCM_005554 Theobroma cacao TCM_005554 N
TCM_016018 Theobroma cacao TCM_016018 N
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N