BRADI3G26920 (Brachypodium distachyon)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 BRADI3G26920 T239899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.497 0.793
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.497 0.793
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.459 0.747
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.459 0.747
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.451 0.667
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.449 0.701
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.449 0.701
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.435 0.747
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.435 0.747
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.423 0.701
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.407 0.655
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.407 0.655
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.397 0.690
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.397 0.690
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.397 0.690
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.391 0.655
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.391 0.655
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.383 0.655
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.383 0.655
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G26920.1 HSF 40 130
BRADI3G26920.2 HSF 5 38
BRADI3G26920.3 HSF 5 38
BRADI3G26920.5 HSF 5 38

Links

Other HSF family TFs
Other Brachypodium distachyon TFs

1455 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29650.m000275 Ricinus communis 29650.m000275 N
AMTR_s00017p00255350 Amborella trichopoda AMTR_s00017p00255350 I
anac032 Vitis vinifera VIT_18s0001g02300 I
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I
ATAF1 Arabidopsis lyrata scaffold_100066.1 I
BGIOSGA014034 Oryza indica BGIOSGA014034 I
BGIOSGA018048 Oryza indica BGIOSGA018048 I
BGIOSGA023457 Oryza indica BGIOSGA023457 N
Bo5g001100 Brassica oleracea Bo5g001100 I
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I
Bra033239 Brassica rapa Bra033239 I
BRADI1G32660 Brachypodium distachyon BRADI1G32660 I
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I
Cagra.6372s0006 Capsella grandiflora Cagra.6372s0006 N
Carubv10009926m.g Capsella rubella Carubv10009926m.g I
Carubv10011081m.g Capsella rubella Carubv10011081m.g N
cassava27052.m1 Manihot esculenta cassava27052.m1 I
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I
Cla023574 Citrullus lanatus Cla023574 N
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I
F775_26920 Aegilops tauschii F775_26920 N
F775_30297 Aegilops tauschii F775_30297 I
GLYMA05G32850 Glycine max GLYMA05G32850 I
GLYMA08G18470 Glycine max GLYMA08G18470 N
GLYMA14G24220 Glycine max GLYMA14G24220 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
GRMZM2G063522 Zea mays GRMZM2G063522 I
GRMZM2G079632 Zea mays GRMZM2G079632 I
GRMZM2G156977 Zea mays GRMZM2G156977 N
GRMZM2G162739 Zea mays GRMZM2G162739 I
GRMZM2G167018 Zea mays GRMZM2G167018 I
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I
LPERR05G13490 Leersia perrieri LPERR05G13490 I
LPERR06G20430 Leersia perrieri LPERR06G20430 N
LPERR07G06440 Leersia perrieri LPERR07G06440 I
mgf004020m Mimulus guttatus mgf004020m I
MLOC_25708 Hordeum vulgare MLOC_25708 N
MLOC_53744 Hordeum vulgare MLOC_53744 N
MLOC_65286 Hordeum vulgare MLOC_65286 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_3g096400 Medicago truncatula MTR_3g096400 N
MTR_8g094580 Medicago truncatula MTR_8g094580 I
NAC002 Arabidopsis thaliana AT1G01720 D
OB05G24820 Oryza brachyantha OB05G24820 I
OBART04G25950 Oryza barthii OBART04G25950 N
OBART05G16540 Oryza barthii OBART05G16540 I
OBART06G24550 Oryza barthii OBART06G24550 N
OGLUM04G25460 Oryza glumaepatula OGLUM04G25460 N
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N
OLONG_010248 Oryza longistaminata OLONG_010248 N
OMERI04G21180 Oryza meridionalis OMERI04G21180 N
OMERI04G25730 Oryza meridionalis OMERI04G25730 I
OMERI05G14410 Oryza meridionalis OMERI05G14410 I
OMERI06G24740 Oryza meridionalis OMERI06G24740 N
ONIVA02G35380 Oryza nivara ONIVA02G35380 N
ONIVA04G24570 Oryza nivara ONIVA04G24570 N
ONIVA04G29890 Oryza nivara ONIVA04G29890 I
ONIVA05G17220 Oryza nivara ONIVA05G17220 I
OPUNC05G14600 Oryza punctata OPUNC05G14600 I
OPUNC06G22270 Oryza punctata OPUNC06G22270 N
ORGLA04G0226100 Oryza glaberrima ORGLA04G0226100 N
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N
OS04G0691300 Oryza sativa OS04G0691300 I
OS05G0415400 Oryza sativa OS05G0415400 I
OS06G0675600 Oryza sativa OS06G0675600 N
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I
Pavir.Db00380 Panicum virgatum Pavir.Db00380 N
Pavir.Fb00532 Panicum virgatum Pavir.Fb00532 N
Pavir.Ga00022 Panicum virgatum Pavir.Ga00022 I
Pavir.Gb00488 Panicum virgatum Pavir.Gb00488 N
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I
Pavir.J36955 Panicum virgatum Pavir.J36955 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
PK26157.1 Cannabis sativa PK26157.1 I
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I
Sb02g006680 Sorghum bicolor Sb02g006680 I
Sb06g028800 Sorghum bicolor Sb06g028800 N
Sb07g005610 Sorghum bicolor Sb07g005610 I
Sb10g027100 Sorghum bicolor Sb10g027100 N
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I
Si004195m.g Setaria italica Si004195m.g I
Si006975m.g Setaria italica Si006975m.g N
Si022714m.g Setaria italica Si022714m.g I
Si022723m.g Setaria italica Si022723m.g I
Si030752m.g Setaria italica Si030752m.g I
Si036303m.g Setaria italica Si036303m.g I
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I
TCM_035160 Theobroma cacao TCM_035160 I
Traes_2AL_CA89051FD Triticum aestivum Traes_2AL_CA89051FD N
Traes_7AL_BE3253C8F Triticum aestivum Traes_7AL_BE3253C8F N
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_03895 Triticum urartu TRIUR3_03895 N
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
TRIUR3_34020 Triticum urartu TRIUR3_34020 N