CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G32660
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI1G32660
T292716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.932
0.591
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.931
0.591
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.931
0.591
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.931
0.591
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G32660.1
NAC/NAM
12
143
PPGFRFHPRDDELVLDYLARKLVGGGGAAAPTIYGCPTMVDVDLNKVEPWDLPEIACIGGKEWYFYSLRDRKYATGQRTNRATESGYWKATGKDRPISRKGLLVGMRKTLVFYQGRAPKGKKTEWVMHEFRK
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.995
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.993
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.991
Si006975m.g
Setaria italica
Si006975m.g
N
0.991
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.990
F775_26920
Aegilops tauschii
F775_26920
N
0.988
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
0.988
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
0.988
MLOC_53744
Hordeum vulgare
MLOC_53744
N
0.988
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.988
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.987
LPERR06G20430
Leersia perrieri
LPERR06G20430
N
0.985
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.985
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.984
Si010680m.g
Setaria italica
Si010680m.g
I
0.984
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.983
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.982
F775_30297
Aegilops tauschii
F775_30297
I
0.978
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.978
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.978
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.978
mgf004020m
Mimulus guttatus
mgf004020m
I
0.956
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.955
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.953
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.953
OBART05G16540
Oryza barthii
OBART05G16540
I
0.953
OS05G0415400
Oryza sativa
OS05G0415400
I
0.953
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.953
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.953
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.953
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.953
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.953
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.953
OPUNC06G22270
Oryza punctata
OPUNC06G22270
N
0.952
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.952
ONIVA02G35380
Oryza nivara
ONIVA02G35380
N
0.951
BGIOSGA023457
Oryza indica
BGIOSGA023457
N
0.951
ORGLA06G0205600
Oryza glaberrima
ORGLA06G0205600
N
0.951
OS06G0675600
Oryza sativa
OS06G0675600
N
0.951
ORUFI06G26420
Oryza rufipogon
ORUFI06G26420
N
0.951
OGLUM06G25850
Oryza glumaepatula
OGLUM06G25850
N
0.951
OBART06G24550
Oryza barthii
OBART06G24550
N
0.951
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.950
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.950
OMERI06G24740
Oryza meridionalis
OMERI06G24740
N
0.950
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.949
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.945
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.945
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.938
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.937
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.937
TCM_035160
Theobroma cacao
TCM_035160
I
0.937
PK26157.1
Cannabis sativa
PK26157.1
I
0.935
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.935
Traes_2AL_CA89051FD
Triticum aestivum
Traes_2AL_CA89051FD
N
0.935
TRIUR3_34020
Triticum urartu
TRIUR3_34020
N
0.935
mgf013201m
Mimulus guttatus
mgf013201m
I
0.935
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.935
Si036303m.g
Setaria italica
Si036303m.g
I
0.934
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.934
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.933
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.933
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.933
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.932
NAC48
Oryza sativa
OS01G0884300
D
0.932
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.932
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.932
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.932
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.932
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.932
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.932
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.932
OBART01G39590
Oryza barthii
OBART01G39590
I
0.932
OB05G24820
Oryza brachyantha
OB05G24820
I
0.932
OB01G48340
Oryza brachyantha
OB01G48340
I
0.932
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.932
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.932
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.932
F775_28813
Aegilops tauschii
F775_28813
I
0.932
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.932
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.932
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.932
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.931
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.931
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.931
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.931
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.931
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.931
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.931
Bra033239
Brassica rapa
Bra033239
I
0.931
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.931
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.931
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.931
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.931
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.931
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.931
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.931
Si002413m.g
Setaria italica
Si002413m.g
I
0.931
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.931
NAC002
Arabidopsis thaliana
AT1G01720
D
0.931
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.930
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.929
29650.m000275
Ricinus communis
29650.m000275
N
0.929
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.929
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.929
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.929
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
0.929
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.929
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.928
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.927
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.927
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.927
Si030752m.g
Setaria italica
Si030752m.g
I
0.926
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.926
Cla023574
Citrullus lanatus
Cla023574
N
0.925
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.925
LPERR05G13140
Leersia perrieri
LPERR05G13140
I
0.923
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.921
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.916
Lus10003848.g
Linum usitatissimum
Lus10003848.g
I
0.914
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
0.912
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.910
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.910
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.910
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.910
Cla011742
Citrullus lanatus
Cla011742
I
0.909
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.907
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.907
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.906
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.906
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.906
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.906
OMERI04G21180
Oryza meridionalis
OMERI04G21180
N
0.904
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.904
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.903
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.903
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.903
OS08G0511200
Oryza sativa
OS08G0511200
I
0.903
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.903
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.902
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.901
Si014180m.g
Setaria italica
Si014180m.g
N
0.900
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.900
mgf002183m
Mimulus guttatus
mgf002183m
I
0.899
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.899
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.899
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.898
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.898
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.898
OGLUM12G13410
Oryza glumaepatula
OGLUM12G13410
I
0.898
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.898
ORGLA04G0226100
Oryza glaberrima
ORGLA04G0226100
N
0.898
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.898
NAC026
Arabidopsis thaliana
AT1G62700
I
0.897
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.897
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.897
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.897
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.897
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
0.896
PK23481.1
Cannabis sativa
PK23481.1
N
0.896
ORUFI10G07040
Oryza rufipogon
ORUFI10G07040
I
0.895
OMERI12G08420
Oryza meridionalis
OMERI12G08420
I
0.895
BGIOSGA037382
Oryza indica
BGIOSGA037382
I
0.895
OS12G0477400
Oryza sativa
OS12G0477400
I
0.895
ONIVA12G11920
Oryza nivara
ONIVA12G11920
I
0.895
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.894
Pavir.Ca02208
Panicum virgatum
Pavir.Ca02208
I
0.894
Pavir.Cb00769
Panicum virgatum
Pavir.Cb00769
I
0.894
Si022924m.g
Setaria italica
Si022924m.g
I
0.894
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.893
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.893
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.892
mgf002365m
Mimulus guttatus
mgf002365m
I
0.892
F775_20638
Aegilops tauschii
F775_20638
I
0.892
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.891
ORUFI04G32410
Oryza rufipogon
ORUFI04G32410
I
0.890
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.890
ORGLA04G0270600
Oryza glaberrima
ORGLA04G0270600
I
0.890
OGLUM04G30580
Oryza glumaepatula
OGLUM04G30580
I
0.890
GRMZM2G083347
Zea mays
GRMZM2G083347
I
0.890
BGIOSGA014034
Oryza indica
BGIOSGA014034
I
0.890
ONIVA04G29890
Oryza nivara
ONIVA04G29890
I
0.890
OS04G0691300
Oryza sativa
OS04G0691300
I
0.890
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.888
OPUNC12G10470
Oryza punctata
OPUNC12G10470
I
0.887
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.885
TCM_029796
Theobroma cacao
TCM_029796
I
0.885
Bra030820
Brassica rapa
Bra030820
N
0.885
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.885
BRADI4G07527
Brachypodium distachyon
BRADI4G07527
I
0.884
MTR_3g096400
Medicago truncatula
MTR_3g096400
N
0.884
Si022714m.g
Setaria italica
Si022714m.g
I
0.882
Ca_13537
Cicer arietinum
Ca_13537
N
0.882
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.882
OBART04G25950
Oryza barthii
OBART04G25950
N
0.882
Cla023594
Citrullus lanatus
Cla023594
I
0.878
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.878
SELMODRAFT_69090
Selaginella moellendorffii
SELMODRAFT_69090
I
0.878
Sb08g014060
Sorghum bicolor
Sb08g014060
I
0.877
SELMODRAFT_71305
Selaginella moellendorffii
SELMODRAFT_71305
I
0.877
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.877
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.877
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.876
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.876
Si022723m.g
Setaria italica
Si022723m.g
I
0.876
Si004195m.g
Setaria italica
Si004195m.g
I
0.876
LPERR12G09780
Leersia perrieri
LPERR12G09780
I
0.876
Bo9g014940
Brassica oleracea
Bo9g014940
I
0.875
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.874
Sb03g000330
Sorghum bicolor
Sb03g000330
I
0.874
Bo2g164090
Brassica oleracea
Bo2g164090
I
0.873
Bra029266
Brassica rapa
Bra029266
I
0.873
Bo3g107700
Brassica oleracea
Bo3g107700
I
0.873
Thhalv10004488m.g
Eutrema salsugineum
Thhalv10004488m.g
I
0.873
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.872
Bra010077
Brassica rapa
Bra010077
I
0.872
Pavir.Ea00010
Panicum virgatum
Pavir.Ea00010
I
0.871