Sb03g034630 (Sorghum bicolor)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Sb03g034630 T242000_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.461 0.736
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.404 0.713
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.404 0.713
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.382 0.701
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.381 0.690
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.381 0.690
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.372 0.632
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.372 0.632
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.371 0.632
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.371 0.632
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.371 0.632
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.367 0.632
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.367 0.632
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.353 0.586
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.353 0.586
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.350 0.598
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.350 0.598
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.348 0.621
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.348 0.621
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g034630.1 HSF 14 104

Links

Other HSF family TFs
Other Sorghum bicolor TFs

1412 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29742.m001447 Ricinus communis 29742.m001447 N
30169.m006531 Ricinus communis 30169.m006531 N
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N
Bo2g046050 Brassica oleracea Bo2g046050 N
Bo2g098940 Brassica oleracea Bo2g098940 N
Bo3g022870 Brassica oleracea Bo3g022870 N
Bo3g039260 Brassica oleracea Bo3g039260 N
Bo3g054440 Brassica oleracea Bo3g054440 N
Bo4g009260 Brassica oleracea Bo4g009260 N
Bo4g197120 Brassica oleracea Bo4g197120 N
Bo9g110930 Brassica oleracea Bo9g110930 N
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N
Bra000941 Brassica rapa Bra000941 N
Bra004539 Brassica rapa Bra004539 N
Bra008539 Brassica rapa Bra008539 N
Bra022637 Brassica rapa Bra022637 N
Bra026297 Brassica rapa Bra026297 N
Bra039283 Brassica rapa Bra039283 N
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N
Cagra.0483s0079 Capsella grandiflora Cagra.0483s0079 N
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N
Carubv10003403m.g Capsella rubella Carubv10003403m.g N
Carubv10011382m.g Capsella rubella Carubv10011382m.g N
Carubv10018233m.g Capsella rubella Carubv10018233m.g N
Carubv10024393m.g Capsella rubella Carubv10024393m.g N
Carubv10024406m.g Capsella rubella Carubv10024406m.g N
Carubv10024964m.g Capsella rubella Carubv10024964m.g N
Carubv10025583m.g Capsella rubella Carubv10025583m.g N
Carubv10027412m.g Capsella rubella Carubv10027412m.g N
cassava10382.m1 Manihot esculenta cassava10382.m1 N
cassava32987.m1 Manihot esculenta cassava32987.m1 N
cassava46504.m1 Manihot esculenta cassava46504.m1 N
Ca_15029 Cicer arietinum Ca_15029 N
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N
Cla011563 Citrullus lanatus Cla011563 N
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N
CPC Arabidopsis thaliana AT2G46410 N
Cucsa.201970 Cucumis sativus Cucsa.201970 N
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N
ETC1 Arabidopsis thaliana AT1G01380 N
ETC3 Arabidopsis thaliana AT4G01060 N
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N
GLYMA01G43435 Glycine max GLYMA01G43435 N
GLYMA11G02061 Glycine max GLYMA11G02061 N
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N
GSMUA_Achr8G05730_001 Musa acuminata GSMUA_Achr8G05730_001 N
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N
Lus10005949.g Linum usitatissimum Lus10005949.g N
Lus10014933.g Linum usitatissimum Lus10014933.g N
Lus10038822.g Linum usitatissimum Lus10038822.g N
MDP0000141474 Malus domestica MDP0000141474 N
MDP0000547418 Malus domestica MDP0000547418 N
MDP0000583070 Malus domestica MDP0000583070 N
MDP0000718806 Malus domestica MDP0000718806 N
MTR_2g088730 Medicago truncatula MTR_2g088730 N
MTR_5g009460 Medicago truncatula MTR_5g009460 N
OPUNC01G23150 Oryza punctata OPUNC01G23150 N
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N
Pm018400 Prunus mume Pm018400 N
Pm019781 Prunus mume Pm019781 N
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N
TCL1 Arabidopsis thaliana AT2G30432 N
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N
TCL2 Arabidopsis thaliana AT2G30424 N
TCL2 Arabidopsis lyrata scaffold_401531.1 N
TCM_005177 Theobroma cacao TCM_005177 N
TCM_015351 Theobroma cacao TCM_015351 N
TCM_016428 Theobroma cacao TCM_016428 N
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N
TRY Arabidopsis thaliana AT5G53200 N
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N