IRF3 (Cavia porcellus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCPOG00000026146 T243990_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF3
M03331_2.00 		Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN		 SELEX
Jolma et al.(2013)
IRF3_1 		0.854 0.854
IRF3
M05531_2.00 		Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH		 SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX 		0.854 0.854
IRF3
M05533_2.00 		Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD		 SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX 		0.854 0.854
IRF3
M09234_2.00 		Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B 		0.854 0.854
IRF3
M10883_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF3_Q3 		0.854 0.854
IRF3
M05532_2.00 		Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM		 SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX 		0.854 0.854
IRF3
M05534_2.00 		Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD		 SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX 		0.854 0.854
Irf3
M00174_2.00 		Mus musculus
RDWNBGMAAS
STTKCVNWHY		 PBM
Badis et al.(2009)
Irf3_3985 		0.835 0.835
Irf3
M09241_2.00 		Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A 		0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000015462 IRF 7 109

Links

Other IRF family TFs
Other Cavia porcellus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATOH1 Bos taurus ENSBTAG00000002895 I
ATOH1 Tupaia belangeri ENSTBEG00000003291 I
ATOH1 Sus scrofa ENSSSCG00000009196 I
Atoh1 Rattus norvegicus ENSRNOG00000006383 I
ATOH1 Pan troglodytes ENSPTRG00000031141 I
ATOH1 Ochotona princeps ENSOPRG00000008973 I
ATOH1 Otolemur garnettii ENSOGAG00000030783 I
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I
Atoh1 Mus musculus ENSMUSG00000073043 D
ATOH1 Monodelphis domestica ENSMODG00000019270 I
ATOH1 Macaca mulatta ENSMMUG00000002367 I
ATOH1 Myotis lucifugus ENSMLUG00000008044 I
ATOH1 Canis familiaris ENSCAFG00000010016 I
ATOH1 Choloepus hoffmanni ENSCHOG00000000748 I
ATOH1 Callithrix jacchus ENSCJAG00000022028 I
ATOH1 Gorilla gorilla ENSGGOG00000001096 I
ATOH1 Homo sapiens ENSG00000172238 D
ATOH1 Echinops telfairi ENSETEG00000019807 I
ATOH1 Equus caballus ENSECAG00000001213 I
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I
atoh1a Tetraodon nigroviridis ENSTNIG00000017584 I
atoh1a Takifugu rubripes ENSTRUG00000012647 I
atoh1a Oryzias latipes ENSORLG00000004876 I
atoh1a Danio rerio ENSDARG00000055294 I
atoh1b Danio rerio ENSDARG00000099564 I
ENSAMXG00000003022 Astyanax mexicanus ENSAMXG00000003022 I
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I
ENSGMOG00000019019 Gadus morhua ENSGMOG00000019019 I
ENSLACG00000005491 Latimeria chalumnae ENSLACG00000005491 I
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I
ENSLOCG00000011944 Lepisosteus oculatus ENSLOCG00000011944 I
ENSLOCG00000017552 Lepisosteus oculatus ENSLOCG00000017552 I
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I
ENSONIG00000015058 Oreochromis niloticus ENSONIG00000015058 I
ENSONIG00000017784 Oreochromis niloticus ENSONIG00000017784 I
ENSP00000302216 Macaca fascicularis ENSP00000302216 I
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I
ENSPFOG00000019101 Poecilia formosa ENSPFOG00000019101 I
ENSPFOG00000023785 Poecilia formosa ENSPFOG00000023785 I
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I
ENSXMAG00000009786 Xiphophorus maculatus ENSXMAG00000009786 I
ENSXMAG00000015349 Xiphophorus maculatus ENSXMAG00000015349 I
ISCW003667 Ixodes scapularis ISCW003667 I
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I
Sakowv30002492m.g Saccoglossus kowalevskii Sakowv30002492m.g I
XP_002937284 Xenopus tropicalis XP_002937284 I