ENSPFOG00000014077 (Poecilia formosa)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPFOG00000014077 T244324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.817 0.817
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.808 0.808
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.798 0.798
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.769 0.769
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.769 0.769
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.769 0.769
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.769 0.769
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.769 0.769
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000014123 IRF 30 133
ENSPFOP00000030875 IRF 9 114

Links

Other IRF family TFs
Other Poecilia formosa TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000021794-D1 Bos grunniens ENSBTAP00000021794-D1 N
ENSCSAG00000001666 Chlorocebus sabaeus ENSCSAG00000001666 I
ENSMPUG00000006646 Mustela putorius furo ENSMPUG00000006646 I
ENSNLEG00000010865 Nomascus leucogenys ENSNLEG00000010865 I
ENSP00000301318 Macaca fascicularis ENSP00000301318 I
ENSPANG00000008416 Papio anubis ENSPANG00000008416 I
ENSPPYG00000010451 Pongo abelii ENSPPYG00000010451 I
ENSSTOG00000022134 Ictidomys tridecemlineatus ENSSTOG00000022134 I
Zfp28 Mus musculus ENSMUSG00000062861 N
ZFP28 Sus scrofa ENSSSCG00000027774 I
Zfp28 Rattus norvegicus ENSRNOG00000042777 I
ZFP28 Pan troglodytes ENSPTRG00000023421 I
ZFP28 Ochotona princeps ENSOPRG00000014306 I
ZFP28 Otolemur garnettii ENSOGAG00000004896 I
ZFP28 Bos taurus ENSBTAG00000002055 N
ZFP28 Macaca mulatta ENSMMUG00000021673 I
ZFP28 Loxodonta africana ENSLAFG00000010041 I
ZFP28 Gorilla gorilla ENSGGOG00000011352 I
ZFP28 Homo sapiens ENSG00000196867 D
ZFP28 Echinops telfairi ENSETEG00000002303 I
ZFP28 Equus caballus ENSECAG00000013849 I
ZFP28 Callithrix jacchus ENSCJAG00000020297 I
ZFP28 Canis familiaris ENSCAFG00000024289 I