irf2 (Takifugu rubripes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTRUG00000001842 T244430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.886 0.886
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.886 0.886
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.886 0.886
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.886 0.886
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.886 0.886
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.886 0.886
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.886 0.886
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.886 0.886
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.886 0.886
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.762 0.762
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.762 0.762
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.762 0.762
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.762 0.762
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.762 0.762
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.762 0.762
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.762 0.762
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000004246 IRF 7 112
ENSTRUP00000004247 IRF 7 112
ENSTRUP00000004248 IRF 7 112
ENSTRUP00000004249 IRF 7 112
ENSTRUP00000004250 IRF 7 112
ENSTRUP00000004251 IRF 7 112
ENSTRUP00000004252 IRF 7 112
ENSTRUP00000004253 IRF 7 112
ENSTRUP00000004254 IRF 7 112

Links

Other IRF family TFs
Other Takifugu rubripes TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I
Aan_R006276 Calypte anna Aan_R006276 I
Afo_R004626 Aptenodytes forsteri Afo_R004626 I
Afo_R011357 Aptenodytes forsteri Afo_R011357 I
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I
BCL11A Anolis carolinensis ENSACAG00000015159 I
BCL11A Callithrix jacchus ENSCJAG00000009226 I
BCL11A Cavia porcellus ENSCPOG00000007587 I
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I
Bcl11a Dipodomys ordii ENSDORG00000010064 I
BCL11A Erinaceus europaeus ENSEEUG00000010958 I
BCL11A Felis catus ENSFCAG00000027154 I
BCL11A Homo sapiens ENSG00000119866 D
BCL11A Gorilla gorilla ENSGGOG00000007337 I
BCL11A Loxodonta africana ENSLAFG00000003101 I
BCL11A Meleagris gallopavo ENSMGAG00000013042 I
BCL11A Microcebus murinus ENSMICG00000015052 I
Bcl11a Mus musculus ENSMUSG00000000861 I
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I
BCL11A Pteropus vampyrus ENSPVAG00000000042 I
Bcl11a Rattus norvegicus ENSRNOG00000007049 I
BCL11A Sus scrofa ENSSSCG00000008392 I
BCL11A Taeniopygia guttata ENSTGUG00000006790 I
BCL11A Tursiops truncatus ENSTTRG00000006191 I
BCL11A Vicugna pacos ENSVPAG00000000491 I
bcl11a Xenopus tropicalis XB-GENE-486641 I
bcl11aa Danio rerio ENSDARG00000061352 I
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I
bcl11aa Oryzias latipes ENSORLG00000001704 I
bcl11aa Takifugu rubripes ENSTRUG00000003815 I
bcl11ab Danio rerio ENSDARG00000063153 I
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I
bcl11ab Oryzias latipes ENSORLG00000013169 I
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I
bcl11ab Takifugu rubripes ENSTRUG00000013751 I
BCL11B Bos taurus ENSBTAG00000018019 I
BCL11B Canis familiaris ENSCAFG00000017809 I
BCL11B Callithrix jacchus ENSCJAG00000006713 I
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I
BCL11B Homo sapiens ENSG00000127152 D
BCL11B Gorilla gorilla ENSGGOG00000001232 I
BCL11B Loxodonta africana ENSLAFG00000009254 I
BCL11B Macaca mulatta ENSMMUG00000003261 I
BCL11B Monodelphis domestica ENSMODG00000012964 I
Bcl11b Mus musculus ENSMUSG00000048251 I
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I
BCL11B Otolemur garnettii ENSOGAG00000033204 I
BCL11B Pan troglodytes ENSPTRG00000006707 I
BCL11B Pteropus vampyrus ENSPVAG00000015516 I
Bcl11b Rattus norvegicus ENSRNOG00000005776 I
BCL11B Sus scrofa ENSSSCG00000002507 I
BCL11B Taeniopygia guttata ENSTGUG00000012711 I
BCL11B Tursiops truncatus ENSTTRG00000012140 I
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I
bcl11ba Oryzias latipes ENSORLG00000010826 I
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I
bcl11ba Takifugu rubripes ENSTRUG00000003531 I
BGLB012676 Biomphalaria glabrata BGLB012676 I
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I
ENSP00000338774 Macaca fascicularis ENSP00000338774 I
ENSP00000349723 Macaca fascicularis ENSP00000349723 I
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I
fgenesh2_pg.scaffold_136000067 Branchiostoma floridae fgenesh2_pg.scaffold_136000067 I
Gfo_R006733 Geospiza fortis Gfo_R006733 I
Gfo_R008167 Geospiza fortis Gfo_R008167 I
HHAL008065-PA Halyomorpha halys HHAL008065-PA I
im:7142702 Danio rerio ENSDARG00000067727 I
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I
im:7142702 Oryzias latipes ENSORLG00000010488 I
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I
im:7142702 Takifugu rubripes ENSTRUG00000018074 I
ISCW016418 Ixodes scapularis ISCW016418 I
L798_02171 Zootermopsis nevadensis L798_02171 I
LotgiG139415 Lottia gigantea LotgiG139415 I
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I
PHUM606430 Pediculus humanus PHUM606430 I
Pvit_09536 Pogona vitticeps Pvit_09536 I
Pvit_18645 Pogona vitticeps Pvit_18645 I
RPRC001562 Rhodnius prolixus RPRC001562 I
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I
SMAR003355 Strigamia maritima SMAR003355 I
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I