VIT_13s0019g03780 (Vitis vinifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 VIT_13s0019g03780 T246255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g03780.t01 LOB 47 145

Links

Other LOB family TFs
Other Vitis vinifera TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30111.m000703 Ricinus communis 30111.m000703 I 0.727
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N 0.747
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N 0.727
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N 0.707
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.707
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.737
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.747
cassava44959.m1 Manihot esculenta cassava44959.m1 N 0.727
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.737
Ca_02507 Cicer arietinum Ca_02507 N 0.727
Ca_04287 Cicer arietinum Ca_04287 I 0.737
Ca_14605 Cicer arietinum Ca_14605 I 0.717
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.707
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I 0.727
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I 0.717
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N 0.717
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.737
Cla000556 Citrullus lanatus Cla000556 I 0.717
Cla005134 Citrullus lanatus Cla005134 N 0.717
Cla020379 Citrullus lanatus Cla020379 I 0.707
CM1887.100.nc Lotus japonicus CM1887.100.nc I 0.747
Cucsa.166030 Cucumis sativus Cucsa.166030 N 0.707
Cucsa.207400 Cucumis sativus Cucsa.207400 N 0.707
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I 0.717
Eucgr.E02410 Eucalyptus grandis Eucgr.E02410 N 0.700
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I 0.727
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.744
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N 0.707
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.717
gene25294-v1.0-hybrid Fragaria vesca gene25294-v1.0-hybrid I 0.707
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.737
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.707
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.727
GLYMA13G40370 Glycine max GLYMA13G40370 I 0.737
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.737
GLYMA20G31780 Glycine max GLYMA20G31780 I 0.747
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I 0.727
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.727
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I 0.727
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.737
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I 0.707
GRMZM2G165805 Zea mays GRMZM2G165805 N 0.717
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I 0.737
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I 0.717
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I 0.727
LPERR05G01520 Leersia perrieri LPERR05G01520 N 0.747
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.707
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.707
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.737
MDP0000123013 Malus domestica MDP0000123013 I 0.747
MDP0000151784 Malus domestica MDP0000151784 I 0.747
MDP0000218986 Malus domestica MDP0000218986 I 0.727
MDP0000318244 Malus domestica MDP0000318244 I 0.727
MDP0000319331 Malus domestica MDP0000319331 I 0.717
MDP0000822986 Malus domestica MDP0000822986 I 0.707
MDP0000879799 Malus domestica MDP0000879799 N 0.747
mgf015666m Mimulus guttatus mgf015666m N 0.707
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.737
MTR_2g093310 Medicago truncatula MTR_2g093310 I 0.737
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.707
OB05G11740 Oryza brachyantha OB05G11740 I 0.717
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.737
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I 0.717
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I 0.727
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N 0.707
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I 0.707
Pavir.J04684 Panicum virgatum Pavir.J04684 I 0.707
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.722
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I 0.717
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.718
PK17019.1 Cannabis sativa PK17019.1 I 0.735
PK23777.1 Cannabis sativa PK23777.1 I 0.727
PK27389.1 Cannabis sativa PK27389.1 I 0.727
Pm000938 Prunus mume Pm000938 I 0.717
Pm018585 Prunus mume Pm018585 I 0.758
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.717
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.727
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.737
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.747
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.727
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.747
Sb09g002190 Sorghum bicolor Sb09g002190 I 0.717
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I 0.727
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.727
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I 0.717
TCM_041094 Theobroma cacao TCM_041094 I 0.727
TCM_043081 Theobroma cacao TCM_043081 I 0.737
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.758
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.737
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.727
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N 0.727
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N 0.727
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N 0.778
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N 0.768
VIT_13s0019g03800 Vitis vinifera VIT_13s0019g03800 N 0.782
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N 0.727
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N 0.788
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N 0.737
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N 0.778